Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.52■□□□□ 0.24
RNFT1Q5M7Z0 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.52■□□□□ 0.24
RNFT1Q5M7Z0 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.52■□□□□ 0.24
RNFT1Q5M7Z0 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.52■□□□□ 0.24
RNFT1Q5M7Z0 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RNFT1Q5M7Z0 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC16.52■□□□□ 0.24
RNFT1Q5M7Z0 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RNFT1Q5M7Z0 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RNFT1Q5M7Z0 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RNFT1Q5M7Z0 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
RNFT1Q5M7Z0 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RNFT1Q5M7Z0 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
RNFT1Q5M7Z0 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
RNFT1Q5M7Z0 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RNFT1Q5M7Z0 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RNFT1Q5M7Z0 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
RNFT1Q5M7Z0 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RNFT1Q5M7Z0 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC16.51■□□□□ 0.23
RNFT1Q5M7Z0 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RNFT1Q5M7Z0 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC16.51■□□□□ 0.23
RNFT1Q5M7Z0 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.51■□□□□ 0.23
RNFT1Q5M7Z0 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
RNFT1Q5M7Z0 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC16.51■□□□□ 0.23
RNFT1Q5M7Z0 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNFT1Q5M7Z0 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.51■□□□□ 0.23
RNFT1Q5M7Z0 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.51■□□□□ 0.23
RNFT1Q5M7Z0 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC16.51■□□□□ 0.23
RNFT1Q5M7Z0 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNFT1Q5M7Z0 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNFT1Q5M7Z0 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RNFT1Q5M7Z0 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RNFT1Q5M7Z0 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.51■□□□□ 0.23
RNFT1Q5M7Z0 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNFT1Q5M7Z0 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.51■□□□□ 0.23
RNFT1Q5M7Z0 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNFT1Q5M7Z0 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
RNFT1Q5M7Z0 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.51■□□□□ 0.23
RNFT1Q5M7Z0 KRT16P4-201ENST00000453883 522 ntBASIC16.51■□□□□ 0.23
RNFT1Q5M7Z0 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16.51■□□□□ 0.23
RNFT1Q5M7Z0 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.51■□□□□ 0.23
RNFT1Q5M7Z0 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.51■□□□□ 0.23
RNFT1Q5M7Z0 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
RNFT1Q5M7Z0 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.51■□□□□ 0.23
RNFT1Q5M7Z0 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16.51■□□□□ 0.23
RNFT1Q5M7Z0 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC16.51■□□□□ 0.23
RNFT1Q5M7Z0 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.51■□□□□ 0.23
RNFT1Q5M7Z0 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.51■□□□□ 0.23
RNFT1Q5M7Z0 AL353801.3-201ENST00000609898 542 ntBASIC16.51■□□□□ 0.23
RNFT1Q5M7Z0 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RNFT1Q5M7Z0 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNFT1Q5M7Z0 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC16.51■□□□□ 0.23
RNFT1Q5M7Z0 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC16.51■□□□□ 0.23
RNFT1Q5M7Z0 AC112777.1-201ENST00000540175 1423 ntBASIC16.51■□□□□ 0.23
RNFT1Q5M7Z0 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
RNFT1Q5M7Z0 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
RNFT1Q5M7Z0 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNFT1Q5M7Z0 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC16.51■□□□□ 0.23
RNFT1Q5M7Z0 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNFT1Q5M7Z0 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNFT1Q5M7Z0 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
RNFT1Q5M7Z0 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RNFT1Q5M7Z0 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.51■□□□□ 0.23
RNFT1Q5M7Z0 AC005082.1-201ENST00000413042 2259 ntBASIC16.5■□□□□ 0.23
RNFT1Q5M7Z0 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNFT1Q5M7Z0 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNFT1Q5M7Z0 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RNFT1Q5M7Z0 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNFT1Q5M7Z0 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNFT1Q5M7Z0 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNFT1Q5M7Z0 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNFT1Q5M7Z0 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
RNFT1Q5M7Z0 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RNFT1Q5M7Z0 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC16.5■□□□□ 0.23
RNFT1Q5M7Z0 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNFT1Q5M7Z0 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC16.5■□□□□ 0.23
RNFT1Q5M7Z0 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNFT1Q5M7Z0 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RNFT1Q5M7Z0 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNFT1Q5M7Z0 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNFT1Q5M7Z0 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
RNFT1Q5M7Z0 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNFT1Q5M7Z0 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNFT1Q5M7Z0 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RNFT1Q5M7Z0 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
RNFT1Q5M7Z0 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RNFT1Q5M7Z0 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC16.5■□□□□ 0.23
RNFT1Q5M7Z0 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16.5■□□□□ 0.23
RNFT1Q5M7Z0 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
RNFT1Q5M7Z0 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RNFT1Q5M7Z0 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.5■□□□□ 0.23
RNFT1Q5M7Z0 AC011840.4-201ENST00000578471 627 ntBASIC16.5■□□□□ 0.23
RNFT1Q5M7Z0 LINC01711-201ENST00000598340 967 ntBASIC16.5■□□□□ 0.23
RNFT1Q5M7Z0 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.5■□□□□ 0.23
RNFT1Q5M7Z0 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.5■□□□□ 0.23
RNFT1Q5M7Z0 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC16.5■□□□□ 0.23
RNFT1Q5M7Z0 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNFT1Q5M7Z0 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNFT1Q5M7Z0 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC16.5■□□□□ 0.23
RNFT1Q5M7Z0 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RNFT1Q5M7Z0 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms