Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC16.18■□□□□ 0.18
CX3CR1P49238 AC008550.1-201ENST00000511500 884 ntBASIC16.18■□□□□ 0.18
CX3CR1P49238 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC16.18■□□□□ 0.18
CX3CR1P49238 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CX3CR1P49238 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC16.18■□□□□ 0.18
CX3CR1P49238 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.18■□□□□ 0.18
CX3CR1P49238 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC16.18■□□□□ 0.18
CX3CR1P49238 CFL2-205ENST00000555765 632 ntTSL 2 BASIC16.18■□□□□ 0.18
CX3CR1P49238 AP005242.2-201ENST00000580065 1175 ntBASIC16.18■□□□□ 0.18
CX3CR1P49238 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC16.18■□□□□ 0.18
CX3CR1P49238 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC16.18■□□□□ 0.18
CX3CR1P49238 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CX3CR1P49238 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.18■□□□□ 0.18
CX3CR1P49238 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CX3CR1P49238 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CX3CR1P49238 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.18■□□□□ 0.18
CX3CR1P49238 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CX3CR1P49238 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CX3CR1P49238 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16.18■□□□□ 0.18
CX3CR1P49238 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CX3CR1P49238 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CX3CR1P49238 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CX3CR1P49238 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CX3CR1P49238 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CX3CR1P49238 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CX3CR1P49238 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
CX3CR1P49238 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CX3CR1P49238 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.17■□□□□ 0.18
CX3CR1P49238 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
CX3CR1P49238 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
CX3CR1P49238 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.17■□□□□ 0.18
CX3CR1P49238 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CX3CR1P49238 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
CX3CR1P49238 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CX3CR1P49238 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CX3CR1P49238 AC034236.2-201ENST00000606662 1610 ntBASIC16.17■□□□□ 0.18
CX3CR1P49238 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
CX3CR1P49238 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CX3CR1P49238 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CX3CR1P49238 UNC93B2-201ENST00000285383 730 ntBASIC16.17■□□□□ 0.18
CX3CR1P49238 AP000593.1-201ENST00000393668 712 ntBASIC16.17■□□□□ 0.18
CX3CR1P49238 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CX3CR1P49238 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC16.17■□□□□ 0.18
CX3CR1P49238 MIR3180-5-201ENST00000583743 153 ntBASIC16.17■□□□□ 0.18
CX3CR1P49238 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC16.17■□□□□ 0.18
CX3CR1P49238 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CX3CR1P49238 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CX3CR1P49238 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CX3CR1P49238 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CX3CR1P49238 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CX3CR1P49238 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CX3CR1P49238 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CX3CR1P49238 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CX3CR1P49238 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.17■□□□□ 0.18
CX3CR1P49238 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.17■□□□□ 0.18
CX3CR1P49238 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CX3CR1P49238 AC135776.1-201ENST00000319817 2481 ntBASIC16.17■□□□□ 0.18
CX3CR1P49238 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CX3CR1P49238 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CX3CR1P49238 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CX3CR1P49238 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CX3CR1P49238 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
CX3CR1P49238 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CX3CR1P49238 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.16■□□□□ 0.18
CX3CR1P49238 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CX3CR1P49238 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CX3CR1P49238 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.16■□□□□ 0.18
CX3CR1P49238 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
CX3CR1P49238 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC16.16■□□□□ 0.18
CX3CR1P49238 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.16■□□□□ 0.18
CX3CR1P49238 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CX3CR1P49238 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CX3CR1P49238 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
CX3CR1P49238 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC16.16■□□□□ 0.18
CX3CR1P49238 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
CX3CR1P49238 TSPY7P-201ENST00000431358 1114 ntBASIC16.16■□□□□ 0.18
CX3CR1P49238 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC16.16■□□□□ 0.18
CX3CR1P49238 RBM17P1-201ENST00000453646 1190 ntBASIC16.16■□□□□ 0.18
CX3CR1P49238 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC16.16■□□□□ 0.18
CX3CR1P49238 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC16.16■□□□□ 0.18
CX3CR1P49238 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC16.16■□□□□ 0.18
CX3CR1P49238 MIR4785-201ENST00000585005 73 ntBASIC16.16■□□□□ 0.18
CX3CR1P49238 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.16■□□□□ 0.18
CX3CR1P49238 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CX3CR1P49238 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CX3CR1P49238 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CX3CR1P49238 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
CX3CR1P49238 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC16.16■□□□□ 0.18
CX3CR1P49238 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CX3CR1P49238 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CX3CR1P49238 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CX3CR1P49238 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.16■□□□□ 0.18
CX3CR1P49238 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.16■□□□□ 0.18
CX3CR1P49238 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CX3CR1P49238 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CX3CR1P49238 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CX3CR1P49238 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CX3CR1P49238 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC16.16■□□□□ 0.18
CX3CR1P49238 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CX3CR1P49238 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms