Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
PCP4P48539 AC007225.1-201ENST00000566331 1836 ntBASIC12.65□□□□□ -0.38
PCP4P48539 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC12.65□□□□□ -0.38
PCP4P48539 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC12.65□□□□□ -0.38
PCP4P48539 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
PCP4P48539 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
PCP4P48539 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
PCP4P48539 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
PCP4P48539 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC12.65□□□□□ -0.38
PCP4P48539 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
PCP4P48539 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC12.65□□□□□ -0.38
PCP4P48539 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
PCP4P48539 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
PCP4P48539 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC12.65□□□□□ -0.38
PCP4P48539 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
PCP4P48539 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
PCP4P48539 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
PCP4P48539 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
PCP4P48539 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
PCP4P48539 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
PCP4P48539 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
PCP4P48539 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
PCP4P48539 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC12.65□□□□□ -0.38
PCP4P48539 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
PCP4P48539 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC12.65□□□□□ -0.38
PCP4P48539 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
PCP4P48539 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
PCP4P48539 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
PCP4P48539 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
PCP4P48539 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
PCP4P48539 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC12.65□□□□□ -0.39
PCP4P48539 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.39
PCP4P48539 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC12.65□□□□□ -0.39
PCP4P48539 TJAP1-205ENST00000372452 2665 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.39
PCP4P48539 WT1-209ENST00000530998 2421 ntTSL 2 BASIC12.64□□□□□ -0.39
PCP4P48539 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC12.64□□□□□ -0.39
PCP4P48539 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
PCP4P48539 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC12.64□□□□□ -0.39
PCP4P48539 GNE-204ENST00000539208 2190 ntTSL 2 BASIC12.64□□□□□ -0.39
PCP4P48539 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC12.64□□□□□ -0.39
PCP4P48539 NTRK2-203ENST00000323115 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
PCP4P48539 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
PCP4P48539 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
PCP4P48539 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
PCP4P48539 TREX1-205ENST00000625293 1783 ntBASIC12.64□□□□□ -0.39
PCP4P48539 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
PCP4P48539 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
PCP4P48539 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
PCP4P48539 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
PCP4P48539 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
PCP4P48539 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
PCP4P48539 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
PCP4P48539 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
PCP4P48539 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
PCP4P48539 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
PCP4P48539 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
PCP4P48539 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
PCP4P48539 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC12.64□□□□□ -0.39
PCP4P48539 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC12.64□□□□□ -0.39
PCP4P48539 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
PCP4P48539 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
PCP4P48539 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC12.64□□□□□ -0.39
PCP4P48539 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
PCP4P48539 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
PCP4P48539 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC12.64□□□□□ -0.39
PCP4P48539 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
PCP4P48539 PIM1-201ENST00000373509 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
PCP4P48539 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
PCP4P48539 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC12.64□□□□□ -0.39
PCP4P48539 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
PCP4P48539 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC12.64□□□□□ -0.39
PCP4P48539 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
PCP4P48539 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
PCP4P48539 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PCP4P48539 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC12.63□□□□□ -0.39
PCP4P48539 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
PCP4P48539 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
PCP4P48539 ABI1-213ENST00000536334 3380 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
PCP4P48539 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
PCP4P48539 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PCP4P48539 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
PCP4P48539 MFF-203ENST00000349901 1716 ntTSL 2 BASIC12.63□□□□□ -0.39
PCP4P48539 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
PCP4P48539 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
PCP4P48539 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
PCP4P48539 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PCP4P48539 MCL1-204ENST00000620947 3626 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
PCP4P48539 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PCP4P48539 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
PCP4P48539 DLX1-201ENST00000341900 2130 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
PCP4P48539 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PCP4P48539 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
PCP4P48539 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC12.63□□□□□ -0.39
PCP4P48539 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC12.63□□□□□ -0.39
PCP4P48539 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
PCP4P48539 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
PCP4P48539 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PCP4P48539 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PCP4P48539 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
PCP4P48539 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms