Protein–RNA interactions for Protein: P18545

PDE6G, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit gamma, humanhuman

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6GP18545 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
PDE6GP18545 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC11.39□□□□□ -0.59
PDE6GP18545 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
PDE6GP18545 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
PDE6GP18545 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
PDE6GP18545 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
PDE6GP18545 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC11.38□□□□□ -0.59
PDE6GP18545 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
PDE6GP18545 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
PDE6GP18545 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
PDE6GP18545 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
PDE6GP18545 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
PDE6GP18545 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC11.38□□□□□ -0.59
PDE6GP18545 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
PDE6GP18545 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
PDE6GP18545 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
PDE6GP18545 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
PDE6GP18545 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
PDE6GP18545 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
PDE6GP18545 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
PDE6GP18545 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
PDE6GP18545 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
PDE6GP18545 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
PDE6GP18545 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
PDE6GP18545 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
PDE6GP18545 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC11.38□□□□□ -0.59
PDE6GP18545 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
PDE6GP18545 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
PDE6GP18545 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC11.38□□□□□ -0.59
PDE6GP18545 CALM3-202ENST00000391918 702 ntTSL 2 BASIC11.38□□□□□ -0.59
PDE6GP18545 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC11.38□□□□□ -0.59
PDE6GP18545 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC11.38□□□□□ -0.59
PDE6GP18545 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC11.38□□□□□ -0.59
PDE6GP18545 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC11.38□□□□□ -0.59
PDE6GP18545 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC11.38□□□□□ -0.59
PDE6GP18545 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
PDE6GP18545 BRWD1-AS2-201ENST00000603064 1028 ntBASIC11.38□□□□□ -0.59
PDE6GP18545 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
PDE6GP18545 AC012354.3-201ENST00000623734 483 ntBASIC11.38□□□□□ -0.59
PDE6GP18545 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
PDE6GP18545 HLA-DQB1-201ENST00000374943 1656 ntBASIC11.38□□□□□ -0.59
PDE6GP18545 HEIH-201ENST00000623091 1652 ntBASIC11.38□□□□□ -0.59
PDE6GP18545 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
PDE6GP18545 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
PDE6GP18545 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
PDE6GP18545 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
PDE6GP18545 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
PDE6GP18545 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC11.38□□□□□ -0.59
PDE6GP18545 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC11.38□□□□□ -0.59
PDE6GP18545 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
PDE6GP18545 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
PDE6GP18545 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
PDE6GP18545 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC11.38□□□□□ -0.59
PDE6GP18545 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
PDE6GP18545 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
PDE6GP18545 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
PDE6GP18545 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
PDE6GP18545 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
PDE6GP18545 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
PDE6GP18545 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC11.38□□□□□ -0.59
PDE6GP18545 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
PDE6GP18545 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
PDE6GP18545 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
PDE6GP18545 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
PDE6GP18545 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC11.38□□□□□ -0.59
PDE6GP18545 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC11.38□□□□□ -0.59
PDE6GP18545 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
PDE6GP18545 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
PDE6GP18545 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
PDE6GP18545 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
PDE6GP18545 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
PDE6GP18545 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
PDE6GP18545 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC11.37□□□□□ -0.59
PDE6GP18545 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
PDE6GP18545 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
PDE6GP18545 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
PDE6GP18545 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
PDE6GP18545 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
PDE6GP18545 AC022211.2-201ENST00000585075 2527 ntBASIC11.37□□□□□ -0.59
PDE6GP18545 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
PDE6GP18545 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
PDE6GP18545 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
PDE6GP18545 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC11.37□□□□□ -0.59
PDE6GP18545 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC11.37□□□□□ -0.59
PDE6GP18545 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC11.37□□□□□ -0.59
PDE6GP18545 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
PDE6GP18545 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
PDE6GP18545 TSPY21P-201ENST00000433481 731 ntBASIC11.37□□□□□ -0.59
PDE6GP18545 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
PDE6GP18545 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
PDE6GP18545 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
PDE6GP18545 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC11.37□□□□□ -0.59
PDE6GP18545 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC11.37□□□□□ -0.59
PDE6GP18545 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC11.37□□□□□ -0.59
PDE6GP18545 AP001160.3-201ENST00000601484 763 ntBASIC11.37□□□□□ -0.59
PDE6GP18545 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
PDE6GP18545 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
PDE6GP18545 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
PDE6GP18545 AL365209.1-201ENST00000624418 6473 ntBASIC11.37□□□□□ -0.59
PDE6GP18545 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms