Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RARAP10276 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RARAP10276 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
RARAP10276 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.31■□□□□ 0.68
RARAP10276 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RARAP10276 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RARAP10276 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RARAP10276 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RARAP10276 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RARAP10276 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
RARAP10276 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC19.3■□□□□ 0.68
RARAP10276 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC19.3■□□□□ 0.68
RARAP10276 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC19.3■□□□□ 0.68
RARAP10276 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RARAP10276 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.3■□□□□ 0.68
RARAP10276 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
RARAP10276 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RARAP10276 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
RARAP10276 BX088651.1-201ENST00000540551 451 ntBASIC19.3■□□□□ 0.68
RARAP10276 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.3■□□□□ 0.68
RARAP10276 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RARAP10276 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC19.3■□□□□ 0.68
RARAP10276 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC19.3■□□□□ 0.68
RARAP10276 CR769767.2-201ENST00000622735 460 ntBASIC19.3■□□□□ 0.68
RARAP10276 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
RARAP10276 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
RARAP10276 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RARAP10276 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
RARAP10276 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RARAP10276 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RARAP10276 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC19.3■□□□□ 0.68
RARAP10276 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
RARAP10276 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RARAP10276 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RARAP10276 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RARAP10276 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RARAP10276 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
RARAP10276 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RARAP10276 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.29■□□□□ 0.68
RARAP10276 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RARAP10276 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
RARAP10276 KRT8P50-201ENST00000562022 1438 ntBASIC19.29■□□□□ 0.68
RARAP10276 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RARAP10276 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RARAP10276 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC19.29■□□□□ 0.68
RARAP10276 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RARAP10276 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RARAP10276 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC19.29■□□□□ 0.68
RARAP10276 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RARAP10276 AC010947.1-201ENST00000623454 693 ntBASIC19.29■□□□□ 0.68
RARAP10276 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RARAP10276 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.29■□□□□ 0.68
RARAP10276 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RARAP10276 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
RARAP10276 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RARAP10276 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RARAP10276 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RARAP10276 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
RARAP10276 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
RARAP10276 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RARAP10276 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RARAP10276 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RARAP10276 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RARAP10276 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.28■□□□□ 0.68
RARAP10276 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
RARAP10276 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
RARAP10276 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RARAP10276 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RARAP10276 MMP23A-201ENST00000234610 1017 ntBASIC19.28■□□□□ 0.68
RARAP10276 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RARAP10276 EGLN1P1-201ENST00000531623 762 ntBASIC19.28■□□□□ 0.68
RARAP10276 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC19.28■□□□□ 0.68
RARAP10276 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RARAP10276 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RARAP10276 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RARAP10276 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RARAP10276 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
RARAP10276 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.28■□□□□ 0.68
RARAP10276 POR-209ENST00000439269 1858 ntTSL 2 BASIC19.28■□□□□ 0.68
RARAP10276 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RARAP10276 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
RARAP10276 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RARAP10276 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC19.28■□□□□ 0.68
RARAP10276 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RARAP10276 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RARAP10276 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RARAP10276 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RARAP10276 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RARAP10276 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RARAP10276 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
RARAP10276 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RARAP10276 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC19.27■□□□□ 0.68
RARAP10276 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
RARAP10276 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
RARAP10276 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.27■□□□□ 0.68
RARAP10276 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
RARAP10276 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
RARAP10276 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
RARAP10276 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
RARAP10276 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms