Protein–RNA interactions for Protein: P02788

LTF, Lactotransferrin, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTFP02788 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LTFP02788 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
LTFP02788 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LTFP02788 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LTFP02788 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LTFP02788 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.21■□□□□ 0.67
LTFP02788 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LTFP02788 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LTFP02788 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LTFP02788 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.2■□□□□ 0.66
LTFP02788 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
LTFP02788 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LTFP02788 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LTFP02788 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LTFP02788 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC19.2■□□□□ 0.66
LTFP02788 VENTXP5-201ENST00000523979 775 ntBASIC19.2■□□□□ 0.66
LTFP02788 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC19.2■□□□□ 0.66
LTFP02788 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC19.2■□□□□ 0.66
LTFP02788 AL121956.5-201ENST00000625261 221 ntBASIC19.2■□□□□ 0.66
LTFP02788 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LTFP02788 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LTFP02788 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LTFP02788 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LTFP02788 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LTFP02788 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LTFP02788 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.2■□□□□ 0.66
LTFP02788 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
LTFP02788 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
LTFP02788 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LTFP02788 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
LTFP02788 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LTFP02788 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LTFP02788 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.19■□□□□ 0.66
LTFP02788 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
LTFP02788 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.19■□□□□ 0.66
LTFP02788 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.19■□□□□ 0.66
LTFP02788 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LTFP02788 NT5C-211ENST00000582170 653 ntTSL 3 BASIC19.19■□□□□ 0.66
LTFP02788 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.19■□□□□ 0.66
LTFP02788 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
LTFP02788 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
LTFP02788 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LTFP02788 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LTFP02788 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LTFP02788 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.19■□□□□ 0.66
LTFP02788 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.19■□□□□ 0.66
LTFP02788 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LTFP02788 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.19■□□□□ 0.66
LTFP02788 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LTFP02788 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.19■□□□□ 0.66
LTFP02788 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
LTFP02788 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC19.19■□□□□ 0.66
LTFP02788 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LTFP02788 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LTFP02788 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.18■□□□□ 0.66
LTFP02788 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.18■□□□□ 0.66
LTFP02788 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LTFP02788 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LTFP02788 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LTFP02788 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LTFP02788 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LTFP02788 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
LTFP02788 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC19.18■□□□□ 0.66
LTFP02788 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
LTFP02788 CD320-202ENST00000537716 1119 ntTSL 2 BASIC19.18■□□□□ 0.66
LTFP02788 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC19.18■□□□□ 0.66
LTFP02788 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC19.18■□□□□ 0.66
LTFP02788 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC19.18■□□□□ 0.66
LTFP02788 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
LTFP02788 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.18■□□□□ 0.66
LTFP02788 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
LTFP02788 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LTFP02788 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.18■□□□□ 0.66
LTFP02788 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.18■□□□□ 0.66
LTFP02788 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.18■□□□□ 0.66
LTFP02788 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LTFP02788 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.18■□□□□ 0.66
LTFP02788 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
LTFP02788 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LTFP02788 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LTFP02788 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19.17■□□□□ 0.66
LTFP02788 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LTFP02788 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
LTFP02788 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC19.17■□□□□ 0.66
LTFP02788 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
LTFP02788 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LTFP02788 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
LTFP02788 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LTFP02788 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LTFP02788 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LTFP02788 ISCU-203ENST00000431221 799 ntTSL 2 BASIC19.17■□□□□ 0.66
LTFP02788 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC19.17■□□□□ 0.66
LTFP02788 RNF146-204ENST00000476956 884 ntTSL 2 BASIC19.17■□□□□ 0.66
LTFP02788 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC19.17■□□□□ 0.66
LTFP02788 TPM1-226ENST00000560959 925 ntTSL 2 BASIC19.17■□□□□ 0.66
LTFP02788 AL136038.3-201ENST00000561909 1096 ntBASIC19.17■□□□□ 0.66
LTFP02788 SPEG-225ENST00000617028 815 ntTSL 5 BASIC19.17■□□□□ 0.66
LTFP02788 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.17■□□□□ 0.66
LTFP02788 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC19.17■□□□□ 0.66
LTFP02788 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms