Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 KRT18P21-201ENST00000515767 1272 ntBASIC16.7■□□□□ 0.26
SMAD9O15198 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
SMAD9O15198 NT5C-210ENST00000582160 860 ntTSL 2 BASIC16.7■□□□□ 0.26
SMAD9O15198 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
SMAD9O15198 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
SMAD9O15198 AC092865.7-201ENST00000641832 219 ntBASIC16.7■□□□□ 0.26
SMAD9O15198 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SMAD9O15198 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SMAD9O15198 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC16.7■□□□□ 0.26
SMAD9O15198 AL357033.4-201ENST00000617703 1807 ntBASIC16.7■□□□□ 0.26
SMAD9O15198 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
SMAD9O15198 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SMAD9O15198 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.7■□□□□ 0.26
SMAD9O15198 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SMAD9O15198 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SMAD9O15198 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
SMAD9O15198 AC104581.1-202ENST00000635932 2618 ntBASIC16.69■□□□□ 0.26
SMAD9O15198 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SMAD9O15198 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
SMAD9O15198 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
SMAD9O15198 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SMAD9O15198 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SMAD9O15198 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SMAD9O15198 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SMAD9O15198 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC16.69■□□□□ 0.26
SMAD9O15198 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SMAD9O15198 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SMAD9O15198 MIR564-202ENST00000385049 94 ntBASIC16.69■□□□□ 0.26
SMAD9O15198 CD70-202ENST00000423145 881 ntTSL 2 BASIC16.69■□□□□ 0.26
SMAD9O15198 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC16.69■□□□□ 0.26
SMAD9O15198 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC16.69■□□□□ 0.26
SMAD9O15198 ELP6-205ENST00000439305 880 ntTSL 2 BASIC16.69■□□□□ 0.26
SMAD9O15198 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC16.69■□□□□ 0.26
SMAD9O15198 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC16.69■□□□□ 0.26
SMAD9O15198 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC16.69■□□□□ 0.26
SMAD9O15198 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC16.69■□□□□ 0.26
SMAD9O15198 CFL2-205ENST00000555765 632 ntTSL 2 BASIC16.69■□□□□ 0.26
SMAD9O15198 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC16.69■□□□□ 0.26
SMAD9O15198 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC16.69■□□□□ 0.26
SMAD9O15198 RN7SL850P-201ENST00000579959 291 ntBASIC16.69■□□□□ 0.26
SMAD9O15198 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC16.69■□□□□ 0.26
SMAD9O15198 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SMAD9O15198 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
SMAD9O15198 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SMAD9O15198 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
SMAD9O15198 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SMAD9O15198 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SMAD9O15198 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
SMAD9O15198 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
SMAD9O15198 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC16.69■□□□□ 0.26
SMAD9O15198 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SMAD9O15198 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
SMAD9O15198 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SMAD9O15198 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SMAD9O15198 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.68■□□□□ 0.26
SMAD9O15198 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
SMAD9O15198 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC16.68■□□□□ 0.26
SMAD9O15198 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SMAD9O15198 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SMAD9O15198 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.68■□□□□ 0.26
SMAD9O15198 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC16.68■□□□□ 0.26
SMAD9O15198 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SMAD9O15198 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC16.68■□□□□ 0.26
SMAD9O15198 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC16.68■□□□□ 0.26
SMAD9O15198 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.68■□□□□ 0.26
SMAD9O15198 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC16.68■□□□□ 0.26
SMAD9O15198 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
SMAD9O15198 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SMAD9O15198 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SMAD9O15198 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SMAD9O15198 Telomerase-vert.1-201ENST00000363312 438 ntBASIC16.68■□□□□ 0.26
SMAD9O15198 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
SMAD9O15198 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC16.68■□□□□ 0.26
SMAD9O15198 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC16.68■□□□□ 0.26
SMAD9O15198 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
SMAD9O15198 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.68■□□□□ 0.26
SMAD9O15198 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SMAD9O15198 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SMAD9O15198 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
SMAD9O15198 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SMAD9O15198 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.68■□□□□ 0.26
SMAD9O15198 AC093525.10-201ENST00000625130 1569 ntBASIC16.68■□□□□ 0.26
SMAD9O15198 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.68■□□□□ 0.26
SMAD9O15198 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SMAD9O15198 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SMAD9O15198 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
SMAD9O15198 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SMAD9O15198 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SMAD9O15198 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SMAD9O15198 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SMAD9O15198 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SMAD9O15198 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
SMAD9O15198 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SMAD9O15198 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SMAD9O15198 Z98044.1-201ENST00000632503 1764 ntBASIC16.67■□□□□ 0.26
SMAD9O15198 CROCCP3-202ENST00000420820 1947 ntBASIC16.67■□□□□ 0.26
SMAD9O15198 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SMAD9O15198 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.67■□□□□ 0.26
SMAD9O15198 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SMAD9O15198 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms