Protein–RNA interactions for Protein: A6NKN8

PCP4L1, Purkinje cell protein 4-like protein 1, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4L1A6NKN8 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCP4L1A6NKN8 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
PCP4L1A6NKN8 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
PCP4L1A6NKN8 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCP4L1A6NKN8 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
PCP4L1A6NKN8 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PCP4L1A6NKN8 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
PCP4L1A6NKN8 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC14.36□□□□□ -0.11
PCP4L1A6NKN8 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
PCP4L1A6NKN8 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
PCP4L1A6NKN8 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PCP4L1A6NKN8 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC14.36□□□□□ -0.11
PCP4L1A6NKN8 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCP4L1A6NKN8 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCP4L1A6NKN8 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14.36□□□□□ -0.11
PCP4L1A6NKN8 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCP4L1A6NKN8 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
PCP4L1A6NKN8 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC14.36□□□□□ -0.11
PCP4L1A6NKN8 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCP4L1A6NKN8 AL023806.1-201ENST00000603994 1649 ntBASIC14.36□□□□□ -0.11
PCP4L1A6NKN8 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCP4L1A6NKN8 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCP4L1A6NKN8 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCP4L1A6NKN8 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC14.36□□□□□ -0.11
PCP4L1A6NKN8 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
PCP4L1A6NKN8 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC14.36□□□□□ -0.11
PCP4L1A6NKN8 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
PCP4L1A6NKN8 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
PCP4L1A6NKN8 AL603756.1-201ENST00000606511 2163 ntBASIC14.36□□□□□ -0.11
PCP4L1A6NKN8 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PCP4L1A6NKN8 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCP4L1A6NKN8 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PCP4L1A6NKN8 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PCP4L1A6NKN8 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.36□□□□□ -0.11
PCP4L1A6NKN8 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PCP4L1A6NKN8 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
PCP4L1A6NKN8 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PCP4L1A6NKN8 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCP4L1A6NKN8 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCP4L1A6NKN8 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
PCP4L1A6NKN8 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC14.35□□□□□ -0.11
PCP4L1A6NKN8 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCP4L1A6NKN8 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC14.35□□□□□ -0.11
PCP4L1A6NKN8 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCP4L1A6NKN8 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCP4L1A6NKN8 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCP4L1A6NKN8 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
PCP4L1A6NKN8 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCP4L1A6NKN8 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PCP4L1A6NKN8 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCP4L1A6NKN8 ADAMTS7P1-201ENST00000613213 4793 ntBASIC14.35□□□□□ -0.11
PCP4L1A6NKN8 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCP4L1A6NKN8 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCP4L1A6NKN8 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCP4L1A6NKN8 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCP4L1A6NKN8 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCP4L1A6NKN8 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCP4L1A6NKN8 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCP4L1A6NKN8 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCP4L1A6NKN8 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCP4L1A6NKN8 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.35□□□□□ -0.11
PCP4L1A6NKN8 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCP4L1A6NKN8 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PCP4L1A6NKN8 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC14.35□□□□□ -0.11
PCP4L1A6NKN8 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCP4L1A6NKN8 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCP4L1A6NKN8 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PCP4L1A6NKN8 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC14.34□□□□□ -0.11
PCP4L1A6NKN8 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
PCP4L1A6NKN8 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC14.34□□□□□ -0.11
PCP4L1A6NKN8 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PCP4L1A6NKN8 AC067750.1-201ENST00000608826 6545 ntBASIC14.34□□□□□ -0.11
PCP4L1A6NKN8 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PCP4L1A6NKN8 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCP4L1A6NKN8 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
PCP4L1A6NKN8 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC14.34□□□□□ -0.11
PCP4L1A6NKN8 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCP4L1A6NKN8 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC14.34□□□□□ -0.11
PCP4L1A6NKN8 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.34□□□□□ -0.11
PCP4L1A6NKN8 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
PCP4L1A6NKN8 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
PCP4L1A6NKN8 POR-209ENST00000439269 1858 ntTSL 2 BASIC14.34□□□□□ -0.11
PCP4L1A6NKN8 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.34□□□□□ -0.11
PCP4L1A6NKN8 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCP4L1A6NKN8 AC106886.4-201ENST00000623557 2502 ntBASIC14.34□□□□□ -0.11
PCP4L1A6NKN8 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC14.34□□□□□ -0.11
PCP4L1A6NKN8 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCP4L1A6NKN8 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCP4L1A6NKN8 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
PCP4L1A6NKN8 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PCP4L1A6NKN8 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCP4L1A6NKN8 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PCP4L1A6NKN8 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC14.34□□□□□ -0.11
PCP4L1A6NKN8 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCP4L1A6NKN8 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCP4L1A6NKN8 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCP4L1A6NKN8 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
PCP4L1A6NKN8 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCP4L1A6NKN8 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCP4L1A6NKN8 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms