Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC13.09□□□□□ -0.31
LINC01549A6NIU2 AC008556.1-201ENST00000610908 2040 ntBASIC13.09□□□□□ -0.31
LINC01549A6NIU2 BID-214ENST00000617586 542 ntTSL 5 BASIC13.09□□□□□ -0.31
LINC01549A6NIU2 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
LINC01549A6NIU2 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
LINC01549A6NIU2 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC13.09□□□□□ -0.31
LINC01549A6NIU2 AL645608.8-201ENST00000606034 2086 ntBASIC13.09□□□□□ -0.31
LINC01549A6NIU2 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC01549A6NIU2 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
LINC01549A6NIU2 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC01549A6NIU2 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC01549A6NIU2 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
LINC01549A6NIU2 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC01549A6NIU2 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
LINC01549A6NIU2 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
LINC01549A6NIU2 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
LINC01549A6NIU2 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC01549A6NIU2 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
LINC01549A6NIU2 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC01549A6NIU2 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC01549A6NIU2 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
LINC01549A6NIU2 AC018695.7-201ENST00000624587 2492 ntBASIC13.08□□□□□ -0.31
LINC01549A6NIU2 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.31
LINC01549A6NIU2 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
LINC01549A6NIU2 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.31
LINC01549A6NIU2 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.31
LINC01549A6NIU2 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC13.08□□□□□ -0.31
LINC01549A6NIU2 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC13.08□□□□□ -0.31
LINC01549A6NIU2 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
LINC01549A6NIU2 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC01549A6NIU2 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC01549A6NIU2 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
LINC01549A6NIU2 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC01549A6NIU2 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC01549A6NIU2 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC01549A6NIU2 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC01549A6NIU2 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
LINC01549A6NIU2 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
LINC01549A6NIU2 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC01549A6NIU2 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC01549A6NIU2 LSM12P1-201ENST00000411836 588 ntBASIC13.08□□□□□ -0.32
LINC01549A6NIU2 AL355472.2-201ENST00000422958 438 ntBASIC13.08□□□□□ -0.32
LINC01549A6NIU2 TSPY23P-201ENST00000440136 739 ntBASIC13.08□□□□□ -0.32
LINC01549A6NIU2 HES2-206ENST00000489730 730 ntTSL 2 BASIC13.08□□□□□ -0.32
LINC01549A6NIU2 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC13.08□□□□□ -0.32
LINC01549A6NIU2 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
LINC01549A6NIU2 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC13.08□□□□□ -0.32
LINC01549A6NIU2 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC13.08□□□□□ -0.32
LINC01549A6NIU2 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC01549A6NIU2 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC13.08□□□□□ -0.32
LINC01549A6NIU2 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
LINC01549A6NIU2 AC068587.6-202ENST00000641839 5619 ntBASIC13.08□□□□□ -0.32
LINC01549A6NIU2 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC01549A6NIU2 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC01549A6NIU2 HLA-DQB1-201ENST00000374943 1656 ntBASIC13.08□□□□□ -0.32
LINC01549A6NIU2 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC01549A6NIU2 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
LINC01549A6NIU2 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC13.08□□□□□ -0.32
LINC01549A6NIU2 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC01549A6NIU2 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC01549A6NIU2 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC01549A6NIU2 CRK-204ENST00000574295 1391 ntTSL 5 BASIC13.07□□□□□ -0.32
LINC01549A6NIU2 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
LINC01549A6NIU2 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LINC01549A6NIU2 REXO1L9P-201ENST00000604264 2108 ntBASIC13.07□□□□□ -0.32
LINC01549A6NIU2 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC01549A6NIU2 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LINC01549A6NIU2 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC01549A6NIU2 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LINC01549A6NIU2 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC01549A6NIU2 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
LINC01549A6NIU2 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LINC01549A6NIU2 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LINC01549A6NIU2 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC13.07□□□□□ -0.32
LINC01549A6NIU2 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LINC01549A6NIU2 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC13.07□□□□□ -0.32
LINC01549A6NIU2 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC13.07□□□□□ -0.32
LINC01549A6NIU2 KRT8P32-201ENST00000512863 1461 ntBASIC13.07□□□□□ -0.32
LINC01549A6NIU2 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC13.07□□□□□ -0.32
LINC01549A6NIU2 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC01549A6NIU2 AD000864.1-201ENST00000624076 2295 ntBASIC13.07□□□□□ -0.32
LINC01549A6NIU2 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LINC01549A6NIU2 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LINC01549A6NIU2 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC01549A6NIU2 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC13.07□□□□□ -0.32
LINC01549A6NIU2 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC01549A6NIU2 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC01549A6NIU2 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC13.07□□□□□ -0.32
LINC01549A6NIU2 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC13.07□□□□□ -0.32
LINC01549A6NIU2 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
LINC01549A6NIU2 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC13.07□□□□□ -0.32
LINC01549A6NIU2 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC01549A6NIU2 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC01549A6NIU2 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC01549A6NIU2 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC01549A6NIU2 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC01549A6NIU2 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
LINC01549A6NIU2 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC13.06□□□□□ -0.32
LINC01549A6NIU2 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC01549A6NIU2 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms