Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TCRBV4S1A1TA0A5B7 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
TCRBV4S1A1TA0A5B7 GAS2L1P1-201ENST00000420145 1480 ntBASIC14.82□□□□□ -0.04
TCRBV4S1A1TA0A5B7 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC14.82□□□□□ -0.04
TCRBV4S1A1TA0A5B7 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC14.82□□□□□ -0.04
TCRBV4S1A1TA0A5B7 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TCRBV4S1A1TA0A5B7 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TCRBV4S1A1TA0A5B7 AC018470.1-201ENST00000624790 3129 ntBASIC14.81□□□□□ -0.04
TCRBV4S1A1TA0A5B7 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TCRBV4S1A1TA0A5B7 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC14.81□□□□□ -0.04
TCRBV4S1A1TA0A5B7 NOC2LP1-202ENST00000452600 2235 ntBASIC14.81□□□□□ -0.04
TCRBV4S1A1TA0A5B7 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TCRBV4S1A1TA0A5B7 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TCRBV4S1A1TA0A5B7 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC14.81□□□□□ -0.04
TCRBV4S1A1TA0A5B7 MADD-208ENST00000405573 1823 ntTSL 5 BASIC14.81□□□□□ -0.04
TCRBV4S1A1TA0A5B7 GOLGA6L5P-202ENST00000515341 1828 ntBASIC14.81□□□□□ -0.04
TCRBV4S1A1TA0A5B7 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TCRBV4S1A1TA0A5B7 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TCRBV4S1A1TA0A5B7 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TCRBV4S1A1TA0A5B7 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TCRBV4S1A1TA0A5B7 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC14.81□□□□□ -0.04
TCRBV4S1A1TA0A5B7 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC14.81□□□□□ -0.04
TCRBV4S1A1TA0A5B7 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC14.81□□□□□ -0.04
TCRBV4S1A1TA0A5B7 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC14.81□□□□□ -0.04
TCRBV4S1A1TA0A5B7 LTBR-211ENST00000543190 785 ntTSL 3 BASIC14.81□□□□□ -0.04
TCRBV4S1A1TA0A5B7 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TCRBV4S1A1TA0A5B7 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TCRBV4S1A1TA0A5B7 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
TCRBV4S1A1TA0A5B7 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
TCRBV4S1A1TA0A5B7 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
TCRBV4S1A1TA0A5B7 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TCRBV4S1A1TA0A5B7 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TCRBV4S1A1TA0A5B7 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TCRBV4S1A1TA0A5B7 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TCRBV4S1A1TA0A5B7 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC14.81□□□□□ -0.04
TCRBV4S1A1TA0A5B7 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TCRBV4S1A1TA0A5B7 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TCRBV4S1A1TA0A5B7 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC14.81□□□□□ -0.04
TCRBV4S1A1TA0A5B7 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC14.81□□□□□ -0.04
TCRBV4S1A1TA0A5B7 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TCRBV4S1A1TA0A5B7 HTR7P1-202ENST00000624664 4411 ntBASIC14.8□□□□□ -0.04
TCRBV4S1A1TA0A5B7 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TCRBV4S1A1TA0A5B7 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
TCRBV4S1A1TA0A5B7 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TCRBV4S1A1TA0A5B7 AC073592.3-201ENST00000625118 1834 ntBASIC14.8□□□□□ -0.04
TCRBV4S1A1TA0A5B7 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TCRBV4S1A1TA0A5B7 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
TCRBV4S1A1TA0A5B7 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TCRBV4S1A1TA0A5B7 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
TCRBV4S1A1TA0A5B7 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TCRBV4S1A1TA0A5B7 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TCRBV4S1A1TA0A5B7 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC14.8□□□□□ -0.04
TCRBV4S1A1TA0A5B7 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TCRBV4S1A1TA0A5B7 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TCRBV4S1A1TA0A5B7 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TCRBV4S1A1TA0A5B7 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TCRBV4S1A1TA0A5B7 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TCRBV4S1A1TA0A5B7 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TCRBV4S1A1TA0A5B7 BUB3-202ENST00000368859 667 ntTSL 3 BASIC14.8□□□□□ -0.04
TCRBV4S1A1TA0A5B7 PHB2-202ENST00000440277 996 ntTSL 5 BASIC14.8□□□□□ -0.04
TCRBV4S1A1TA0A5B7 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TCRBV4S1A1TA0A5B7 CBFB-203ENST00000561924 584 ntTSL 5 BASIC14.8□□□□□ -0.04
TCRBV4S1A1TA0A5B7 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC14.8□□□□□ -0.04
TCRBV4S1A1TA0A5B7 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC14.8□□□□□ -0.04
TCRBV4S1A1TA0A5B7 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
TCRBV4S1A1TA0A5B7 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
TCRBV4S1A1TA0A5B7 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TCRBV4S1A1TA0A5B7 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TCRBV4S1A1TA0A5B7 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC14.8□□□□□ -0.04
TCRBV4S1A1TA0A5B7 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC14.8□□□□□ -0.04
TCRBV4S1A1TA0A5B7 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC14.8□□□□□ -0.04
TCRBV4S1A1TA0A5B7 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TCRBV4S1A1TA0A5B7 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TCRBV4S1A1TA0A5B7 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC14.8□□□□□ -0.04
TCRBV4S1A1TA0A5B7 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TCRBV4S1A1TA0A5B7 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TCRBV4S1A1TA0A5B7 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC14.8□□□□□ -0.04
TCRBV4S1A1TA0A5B7 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
TCRBV4S1A1TA0A5B7 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TCRBV4S1A1TA0A5B7 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC14.8□□□□□ -0.04
TCRBV4S1A1TA0A5B7 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TCRBV4S1A1TA0A5B7 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TCRBV4S1A1TA0A5B7 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TCRBV4S1A1TA0A5B7 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TCRBV4S1A1TA0A5B7 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
TCRBV4S1A1TA0A5B7 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC14.79□□□□□ -0.04
TCRBV4S1A1TA0A5B7 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TCRBV4S1A1TA0A5B7 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TCRBV4S1A1TA0A5B7 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
TCRBV4S1A1TA0A5B7 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TCRBV4S1A1TA0A5B7 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TCRBV4S1A1TA0A5B7 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TCRBV4S1A1TA0A5B7 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TCRBV4S1A1TA0A5B7 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC14.79□□□□□ -0.04
TCRBV4S1A1TA0A5B7 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TCRBV4S1A1TA0A5B7 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC14.79□□□□□ -0.04
TCRBV4S1A1TA0A5B7 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
TCRBV4S1A1TA0A5B7 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC14.79□□□□□ -0.04
TCRBV4S1A1TA0A5B7 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC14.79□□□□□ -0.04
TCRBV4S1A1TA0A5B7 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms