Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC14.31□□□□□ -0.12
TRAV5A0A0B4J249 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
TRAV5A0A0B4J249 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV5A0A0B4J249 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV5A0A0B4J249 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
TRAV5A0A0B4J249 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV5A0A0B4J249 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV5A0A0B4J249 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC14.31□□□□□ -0.12
TRAV5A0A0B4J249 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
TRAV5A0A0B4J249 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV5A0A0B4J249 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV5A0A0B4J249 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV5A0A0B4J249 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
TRAV5A0A0B4J249 PTPA-216ENST00000432651 857 ntTSL 2 BASIC14.31□□□□□ -0.12
TRAV5A0A0B4J249 SLC25A6P5-201ENST00000435663 894 ntBASIC14.31□□□□□ -0.12
TRAV5A0A0B4J249 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC14.31□□□□□ -0.12
TRAV5A0A0B4J249 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC14.31□□□□□ -0.12
TRAV5A0A0B4J249 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV5A0A0B4J249 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV5A0A0B4J249 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV5A0A0B4J249 PRSS44-201ENST00000515154 1146 ntBASIC14.31□□□□□ -0.12
TRAV5A0A0B4J249 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC14.31□□□□□ -0.12
TRAV5A0A0B4J249 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC14.31□□□□□ -0.12
TRAV5A0A0B4J249 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
TRAV5A0A0B4J249 AC233263.1-201ENST00000578059 224 ntBASIC14.31□□□□□ -0.12
TRAV5A0A0B4J249 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC14.31□□□□□ -0.12
TRAV5A0A0B4J249 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC14.31□□□□□ -0.12
TRAV5A0A0B4J249 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV5A0A0B4J249 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV5A0A0B4J249 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC14.31□□□□□ -0.12
TRAV5A0A0B4J249 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV5A0A0B4J249 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV5A0A0B4J249 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC14.31□□□□□ -0.12
TRAV5A0A0B4J249 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC14.31□□□□□ -0.12
TRAV5A0A0B4J249 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV5A0A0B4J249 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV5A0A0B4J249 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC14.3□□□□□ -0.12
TRAV5A0A0B4J249 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC14.3□□□□□ -0.12
TRAV5A0A0B4J249 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV5A0A0B4J249 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV5A0A0B4J249 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC14.3□□□□□ -0.12
TRAV5A0A0B4J249 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV5A0A0B4J249 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
TRAV5A0A0B4J249 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV5A0A0B4J249 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV5A0A0B4J249 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV5A0A0B4J249 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV5A0A0B4J249 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV5A0A0B4J249 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV5A0A0B4J249 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
TRAV5A0A0B4J249 KRASP1-201ENST00000407852 552 ntBASIC14.3□□□□□ -0.12
TRAV5A0A0B4J249 DERL1-203ENST00000419562 918 ntTSL 2 BASIC14.3□□□□□ -0.12
TRAV5A0A0B4J249 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV5A0A0B4J249 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV5A0A0B4J249 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
TRAV5A0A0B4J249 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC14.3□□□□□ -0.12
TRAV5A0A0B4J249 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV5A0A0B4J249 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC14.3□□□□□ -0.12
TRAV5A0A0B4J249 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
TRAV5A0A0B4J249 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC14.3□□□□□ -0.12
TRAV5A0A0B4J249 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV5A0A0B4J249 AC131212.4-201ENST00000623606 975 ntBASIC14.3□□□□□ -0.12
TRAV5A0A0B4J249 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC14.3□□□□□ -0.12
TRAV5A0A0B4J249 AL023875.1-201ENST00000640777 796 ntBASIC14.3□□□□□ -0.12
TRAV5A0A0B4J249 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC14.3□□□□□ -0.12
TRAV5A0A0B4J249 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC14.3□□□□□ -0.12
TRAV5A0A0B4J249 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV5A0A0B4J249 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
TRAV5A0A0B4J249 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV5A0A0B4J249 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
TRAV5A0A0B4J249 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV5A0A0B4J249 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV5A0A0B4J249 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC14.3□□□□□ -0.12
TRAV5A0A0B4J249 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV5A0A0B4J249 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV5A0A0B4J249 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC14.3□□□□□ -0.12
TRAV5A0A0B4J249 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV5A0A0B4J249 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC14.3□□□□□ -0.12
TRAV5A0A0B4J249 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV5A0A0B4J249 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC14.3□□□□□ -0.12
TRAV5A0A0B4J249 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC14.3□□□□□ -0.12
TRAV5A0A0B4J249 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV5A0A0B4J249 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV5A0A0B4J249 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV5A0A0B4J249 AC099343.3-201ENST00000605834 2503 ntBASIC14.3□□□□□ -0.12
TRAV5A0A0B4J249 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC14.29□□□□□ -0.12
TRAV5A0A0B4J249 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC14.29□□□□□ -0.12
TRAV5A0A0B4J249 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC14.29□□□□□ -0.12
TRAV5A0A0B4J249 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV5A0A0B4J249 AC099398.1-201ENST00000567919 2776 ntBASIC14.29□□□□□ -0.12
TRAV5A0A0B4J249 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC14.29□□□□□ -0.12
TRAV5A0A0B4J249 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
TRAV5A0A0B4J249 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV5A0A0B4J249 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV5A0A0B4J249 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV5A0A0B4J249 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
TRAV5A0A0B4J249 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV5A0A0B4J249 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV5A0A0B4J249 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC14.29□□□□□ -0.12
TRAV5A0A0B4J249 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms