Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC13.88□□□□□ -0.19
HLA-DRB4X5D2U9 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC13.88□□□□□ -0.19
HLA-DRB4X5D2U9 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC13.88□□□□□ -0.19
HLA-DRB4X5D2U9 AL023803.3-201ENST00000615559 522 ntBASIC13.88□□□□□ -0.19
HLA-DRB4X5D2U9 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HLA-DRB4X5D2U9 AC116562.4-202ENST00000641738 218 ntBASIC13.88□□□□□ -0.19
HLA-DRB4X5D2U9 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
HLA-DRB4X5D2U9 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
HLA-DRB4X5D2U9 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC13.88□□□□□ -0.19
HLA-DRB4X5D2U9 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HLA-DRB4X5D2U9 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
HLA-DRB4X5D2U9 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
HLA-DRB4X5D2U9 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC13.88□□□□□ -0.19
HLA-DRB4X5D2U9 GPAT2P1-201ENST00000444924 1672 ntBASIC13.88□□□□□ -0.19
HLA-DRB4X5D2U9 AC068880.1-201ENST00000507289 2297 ntBASIC13.88□□□□□ -0.19
HLA-DRB4X5D2U9 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HLA-DRB4X5D2U9 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC13.88□□□□□ -0.19
HLA-DRB4X5D2U9 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
HLA-DRB4X5D2U9 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HLA-DRB4X5D2U9 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
HLA-DRB4X5D2U9 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HLA-DRB4X5D2U9 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
HLA-DRB4X5D2U9 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HLA-DRB4X5D2U9 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HLA-DRB4X5D2U9 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC13.87□□□□□ -0.19
HLA-DRB4X5D2U9 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC13.87□□□□□ -0.19
HLA-DRB4X5D2U9 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HLA-DRB4X5D2U9 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
HLA-DRB4X5D2U9 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HLA-DRB4X5D2U9 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
HLA-DRB4X5D2U9 PKD1P1-201ENST00000458669 6805 ntBASIC13.87□□□□□ -0.19
HLA-DRB4X5D2U9 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
HLA-DRB4X5D2U9 MMP23A-201ENST00000234610 1017 ntBASIC13.87□□□□□ -0.19
HLA-DRB4X5D2U9 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HLA-DRB4X5D2U9 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
HLA-DRB4X5D2U9 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HLA-DRB4X5D2U9 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC13.87□□□□□ -0.19
HLA-DRB4X5D2U9 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC13.87□□□□□ -0.19
HLA-DRB4X5D2U9 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HLA-DRB4X5D2U9 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC13.87□□□□□ -0.19
HLA-DRB4X5D2U9 AL353719.1-201ENST00000566847 864 ntBASIC13.87□□□□□ -0.19
HLA-DRB4X5D2U9 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC13.87□□□□□ -0.19
HLA-DRB4X5D2U9 MYC-208ENST00000641036 567 ntBASIC13.87□□□□□ -0.19
HLA-DRB4X5D2U9 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HLA-DRB4X5D2U9 HR-201ENST00000312841 5351 ntTSL 5 BASIC13.87□□□□□ -0.19
HLA-DRB4X5D2U9 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC13.87□□□□□ -0.19
HLA-DRB4X5D2U9 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
HLA-DRB4X5D2U9 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
HLA-DRB4X5D2U9 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HLA-DRB4X5D2U9 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC13.87□□□□□ -0.19
HLA-DRB4X5D2U9 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC13.87□□□□□ -0.19
HLA-DRB4X5D2U9 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HLA-DRB4X5D2U9 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC13.87□□□□□ -0.19
HLA-DRB4X5D2U9 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
HLA-DRB4X5D2U9 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC13.86□□□□□ -0.19
HLA-DRB4X5D2U9 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
HLA-DRB4X5D2U9 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HLA-DRB4X5D2U9 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HLA-DRB4X5D2U9 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HLA-DRB4X5D2U9 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HLA-DRB4X5D2U9 TSPY14P-201ENST00000303979 915 ntBASIC13.86□□□□□ -0.19
HLA-DRB4X5D2U9 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC13.86□□□□□ -0.19
HLA-DRB4X5D2U9 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
HLA-DRB4X5D2U9 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
HLA-DRB4X5D2U9 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC13.86□□□□□ -0.19
HLA-DRB4X5D2U9 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC13.86□□□□□ -0.19
HLA-DRB4X5D2U9 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC13.86□□□□□ -0.19
HLA-DRB4X5D2U9 EGLN1P1-201ENST00000531623 762 ntBASIC13.86□□□□□ -0.19
HLA-DRB4X5D2U9 BX088651.1-201ENST00000540551 451 ntBASIC13.86□□□□□ -0.19
HLA-DRB4X5D2U9 NAPSB-206ENST00000562112 1266 ntBASIC13.86□□□□□ -0.19
HLA-DRB4X5D2U9 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC13.86□□□□□ -0.19
HLA-DRB4X5D2U9 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC13.86□□□□□ -0.19
HLA-DRB4X5D2U9 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
HLA-DRB4X5D2U9 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
HLA-DRB4X5D2U9 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC13.86□□□□□ -0.19
HLA-DRB4X5D2U9 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
HLA-DRB4X5D2U9 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC13.86□□□□□ -0.19
HLA-DRB4X5D2U9 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HLA-DRB4X5D2U9 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
HLA-DRB4X5D2U9 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HLA-DRB4X5D2U9 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC13.86□□□□□ -0.19
HLA-DRB4X5D2U9 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
HLA-DRB4X5D2U9 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
HLA-DRB4X5D2U9 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
HLA-DRB4X5D2U9 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HLA-DRB4X5D2U9 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
HLA-DRB4X5D2U9 AL357033.4-201ENST00000617703 1807 ntBASIC13.85□□□□□ -0.19
HLA-DRB4X5D2U9 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
HLA-DRB4X5D2U9 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
HLA-DRB4X5D2U9 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HLA-DRB4X5D2U9 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC13.85□□□□□ -0.19
HLA-DRB4X5D2U9 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC13.85□□□□□ -0.19
HLA-DRB4X5D2U9 AC008556.1-201ENST00000610908 2040 ntBASIC13.85□□□□□ -0.19
HLA-DRB4X5D2U9 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC13.85□□□□□ -0.19
HLA-DRB4X5D2U9 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC13.85□□□□□ -0.19
HLA-DRB4X5D2U9 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC13.85□□□□□ -0.19
HLA-DRB4X5D2U9 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HLA-DRB4X5D2U9 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
HLA-DRB4X5D2U9 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HLA-DRB4X5D2U9 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms