Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RAI2Q9Y5P3 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAI2Q9Y5P3 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAI2Q9Y5P3 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RAI2Q9Y5P3 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.61■□□□□ 0.57
RAI2Q9Y5P3 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAI2Q9Y5P3 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAI2Q9Y5P3 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
RAI2Q9Y5P3 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAI2Q9Y5P3 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
RAI2Q9Y5P3 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAI2Q9Y5P3 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAI2Q9Y5P3 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAI2Q9Y5P3 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAI2Q9Y5P3 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAI2Q9Y5P3 MIR149-201ENST00000384879 89 ntBASIC18.61■□□□□ 0.57
RAI2Q9Y5P3 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAI2Q9Y5P3 SPDYE15P-201ENST00000424157 909 ntBASIC18.61■□□□□ 0.57
RAI2Q9Y5P3 HOMER2P1-201ENST00000455653 964 ntBASIC18.61■□□□□ 0.57
RAI2Q9Y5P3 AC092647.4-201ENST00000457211 535 ntBASIC18.61■□□□□ 0.57
RAI2Q9Y5P3 RASA4DP-201ENST00000460726 1199 ntBASIC18.61■□□□□ 0.57
RAI2Q9Y5P3 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.61■□□□□ 0.57
RAI2Q9Y5P3 AC009065.1-201ENST00000564055 1225 ntBASIC18.61■□□□□ 0.57
RAI2Q9Y5P3 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.61■□□□□ 0.57
RAI2Q9Y5P3 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAI2Q9Y5P3 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.61■□□□□ 0.57
RAI2Q9Y5P3 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.61■□□□□ 0.57
RAI2Q9Y5P3 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAI2Q9Y5P3 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
RAI2Q9Y5P3 AC020763.4-201ENST00000623414 4170 ntBASIC18.61■□□□□ 0.57
RAI2Q9Y5P3 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
RAI2Q9Y5P3 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAI2Q9Y5P3 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAI2Q9Y5P3 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAI2Q9Y5P3 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RAI2Q9Y5P3 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
RAI2Q9Y5P3 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RAI2Q9Y5P3 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAI2Q9Y5P3 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.6■□□□□ 0.57
RAI2Q9Y5P3 STARP1-201ENST00000397973 869 ntBASIC18.6■□□□□ 0.57
RAI2Q9Y5P3 PCED1CP-201ENST00000419887 785 ntBASIC18.6■□□□□ 0.57
RAI2Q9Y5P3 KRT18P38-201ENST00000449496 1282 ntBASIC18.6■□□□□ 0.57
RAI2Q9Y5P3 AL359075.1-203ENST00000462729 1002 ntBASIC18.6■□□□□ 0.57
RAI2Q9Y5P3 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RAI2Q9Y5P3 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.6■□□□□ 0.57
RAI2Q9Y5P3 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.6■□□□□ 0.57
RAI2Q9Y5P3 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC18.6■□□□□ 0.57
RAI2Q9Y5P3 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAI2Q9Y5P3 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.6■□□□□ 0.57
RAI2Q9Y5P3 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC18.6■□□□□ 0.57
RAI2Q9Y5P3 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.6■□□□□ 0.57
RAI2Q9Y5P3 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAI2Q9Y5P3 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAI2Q9Y5P3 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAI2Q9Y5P3 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAI2Q9Y5P3 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAI2Q9Y5P3 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAI2Q9Y5P3 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAI2Q9Y5P3 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.6■□□□□ 0.57
RAI2Q9Y5P3 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAI2Q9Y5P3 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.59■□□□□ 0.57
RAI2Q9Y5P3 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.59■□□□□ 0.57
RAI2Q9Y5P3 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAI2Q9Y5P3 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RAI2Q9Y5P3 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.59■□□□□ 0.57
RAI2Q9Y5P3 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAI2Q9Y5P3 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RAI2Q9Y5P3 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
RAI2Q9Y5P3 AC009102.3-201ENST00000623118 1491 ntBASIC18.59■□□□□ 0.57
RAI2Q9Y5P3 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAI2Q9Y5P3 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RAI2Q9Y5P3 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.59■□□□□ 0.57
RAI2Q9Y5P3 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAI2Q9Y5P3 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAI2Q9Y5P3 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RAI2Q9Y5P3 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.59■□□□□ 0.57
RAI2Q9Y5P3 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC18.59■□□□□ 0.57
RAI2Q9Y5P3 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RAI2Q9Y5P3 CD320-202ENST00000537716 1119 ntTSL 2 BASIC18.59■□□□□ 0.57
RAI2Q9Y5P3 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.59■□□□□ 0.57
RAI2Q9Y5P3 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC18.59■□□□□ 0.57
RAI2Q9Y5P3 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RAI2Q9Y5P3 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RAI2Q9Y5P3 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.59■□□□□ 0.57
RAI2Q9Y5P3 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
RAI2Q9Y5P3 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAI2Q9Y5P3 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RAI2Q9Y5P3 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAI2Q9Y5P3 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.59■□□□□ 0.57
RAI2Q9Y5P3 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAI2Q9Y5P3 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.59■□□□□ 0.57
RAI2Q9Y5P3 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAI2Q9Y5P3 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
RAI2Q9Y5P3 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RAI2Q9Y5P3 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.57
RAI2Q9Y5P3 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RAI2Q9Y5P3 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.58■□□□□ 0.57
RAI2Q9Y5P3 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
RAI2Q9Y5P3 SDHAP2-201ENST00000455183 2001 ntBASIC18.58■□□□□ 0.56
RAI2Q9Y5P3 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms