Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGA11Q9Y5H2 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGA11Q9Y5H2 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGA11Q9Y5H2 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGA11Q9Y5H2 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.87■□□□□ 0.45
PCDHGA11Q9Y5H2 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGA11Q9Y5H2 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGA11Q9Y5H2 FZD10-202ENST00000539839 3282 ntBASIC17.87■□□□□ 0.45
PCDHGA11Q9Y5H2 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGA11Q9Y5H2 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGA11Q9Y5H2 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
PCDHGA11Q9Y5H2 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGA11Q9Y5H2 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGA11Q9Y5H2 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGA11Q9Y5H2 AL390955.1-201ENST00000428694 934 ntBASIC17.87■□□□□ 0.45
PCDHGA11Q9Y5H2 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGA11Q9Y5H2 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.87■□□□□ 0.45
PCDHGA11Q9Y5H2 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
PCDHGA11Q9Y5H2 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGA11Q9Y5H2 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.87■□□□□ 0.45
PCDHGA11Q9Y5H2 AP003041.3-201ENST00000527151 707 ntBASIC17.87■□□□□ 0.45
PCDHGA11Q9Y5H2 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.87■□□□□ 0.45
PCDHGA11Q9Y5H2 BX088651.1-201ENST00000540551 451 ntBASIC17.87■□□□□ 0.45
PCDHGA11Q9Y5H2 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.87■□□□□ 0.45
PCDHGA11Q9Y5H2 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.87■□□□□ 0.45
PCDHGA11Q9Y5H2 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGA11Q9Y5H2 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGA11Q9Y5H2 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
PCDHGA11Q9Y5H2 AC092338.2-201ENST00000568827 1415 ntBASIC17.87■□□□□ 0.45
PCDHGA11Q9Y5H2 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGA11Q9Y5H2 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGA11Q9Y5H2 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.87■□□□□ 0.45
PCDHGA11Q9Y5H2 AL162741.1-201ENST00000565563 1558 ntBASIC17.87■□□□□ 0.45
PCDHGA11Q9Y5H2 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGA11Q9Y5H2 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGA11Q9Y5H2 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGA11Q9Y5H2 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGA11Q9Y5H2 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGA11Q9Y5H2 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGA11Q9Y5H2 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.86■□□□□ 0.45
PCDHGA11Q9Y5H2 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGA11Q9Y5H2 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.86■□□□□ 0.45
PCDHGA11Q9Y5H2 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGA11Q9Y5H2 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.86■□□□□ 0.45
PCDHGA11Q9Y5H2 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGA11Q9Y5H2 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGA11Q9Y5H2 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGA11Q9Y5H2 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGA11Q9Y5H2 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.86■□□□□ 0.45
PCDHGA11Q9Y5H2 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.86■□□□□ 0.45
PCDHGA11Q9Y5H2 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.86■□□□□ 0.45
PCDHGA11Q9Y5H2 MIR4674-201ENST00000582457 87 ntBASIC17.86■□□□□ 0.45
PCDHGA11Q9Y5H2 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
PCDHGA11Q9Y5H2 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.86■□□□□ 0.45
PCDHGA11Q9Y5H2 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGA11Q9Y5H2 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGA11Q9Y5H2 AC067852.2-201ENST00000590513 2313 ntBASIC17.86■□□□□ 0.45
PCDHGA11Q9Y5H2 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGA11Q9Y5H2 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHGA11Q9Y5H2 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHGA11Q9Y5H2 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHGA11Q9Y5H2 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHGA11Q9Y5H2 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.85■□□□□ 0.45
PCDHGA11Q9Y5H2 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
PCDHGA11Q9Y5H2 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.85■□□□□ 0.45
PCDHGA11Q9Y5H2 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.85■□□□□ 0.45
PCDHGA11Q9Y5H2 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHGA11Q9Y5H2 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.85■□□□□ 0.45
PCDHGA11Q9Y5H2 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.85■□□□□ 0.45
PCDHGA11Q9Y5H2 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.85■□□□□ 0.45
PCDHGA11Q9Y5H2 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
PCDHGA11Q9Y5H2 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.85■□□□□ 0.45
PCDHGA11Q9Y5H2 DET1-205ENST00000558413 583 ntTSL 4 BASIC17.85■□□□□ 0.45
PCDHGA11Q9Y5H2 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.85■□□□□ 0.45
PCDHGA11Q9Y5H2 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHGA11Q9Y5H2 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.85■□□□□ 0.45
PCDHGA11Q9Y5H2 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHGA11Q9Y5H2 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHGA11Q9Y5H2 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.84■□□□□ 0.45
PCDHGA11Q9Y5H2 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
PCDHGA11Q9Y5H2 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.84■□□□□ 0.45
PCDHGA11Q9Y5H2 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHGA11Q9Y5H2 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHGA11Q9Y5H2 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHGA11Q9Y5H2 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHGA11Q9Y5H2 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHGA11Q9Y5H2 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHGA11Q9Y5H2 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHGA11Q9Y5H2 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
PCDHGA11Q9Y5H2 TSPY14P-201ENST00000303979 915 ntBASIC17.84■□□□□ 0.45
PCDHGA11Q9Y5H2 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.84■□□□□ 0.45
PCDHGA11Q9Y5H2 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHGA11Q9Y5H2 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.84■□□□□ 0.45
PCDHGA11Q9Y5H2 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.84■□□□□ 0.45
PCDHGA11Q9Y5H2 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.84■□□□□ 0.45
PCDHGA11Q9Y5H2 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.84■□□□□ 0.45
PCDHGA11Q9Y5H2 EGLN1P1-201ENST00000531623 762 ntBASIC17.84■□□□□ 0.45
PCDHGA11Q9Y5H2 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHGA11Q9Y5H2 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.84■□□□□ 0.45
PCDHGA11Q9Y5H2 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms