Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC19.2■□□□□ 0.66
YIPF1Q9Y548 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC19.2■□□□□ 0.66
YIPF1Q9Y548 GXYLT1P4-201ENST00000613576 1192 ntBASIC19.2■□□□□ 0.66
YIPF1Q9Y548 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
YIPF1Q9Y548 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
YIPF1Q9Y548 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
YIPF1Q9Y548 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
YIPF1Q9Y548 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
YIPF1Q9Y548 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.2■□□□□ 0.66
YIPF1Q9Y548 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
YIPF1Q9Y548 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
YIPF1Q9Y548 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
YIPF1Q9Y548 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
YIPF1Q9Y548 NARF-204ENST00000390006 1766 ntTSL 2 BASIC19.19■□□□□ 0.66
YIPF1Q9Y548 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
YIPF1Q9Y548 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
YIPF1Q9Y548 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
YIPF1Q9Y548 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
YIPF1Q9Y548 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
YIPF1Q9Y548 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
YIPF1Q9Y548 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
YIPF1Q9Y548 NUS1P2-201ENST00000417358 873 ntBASIC19.19■□□□□ 0.66
YIPF1Q9Y548 AC079781.3-201ENST00000449110 356 ntBASIC19.19■□□□□ 0.66
YIPF1Q9Y548 TPM1-218ENST00000559281 851 ntTSL 5 BASIC19.19■□□□□ 0.66
YIPF1Q9Y548 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC19.19■□□□□ 0.66
YIPF1Q9Y548 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC19.19■□□□□ 0.66
YIPF1Q9Y548 CCNC-219ENST00000627680 896 ntTSL 5 BASIC19.19■□□□□ 0.66
YIPF1Q9Y548 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
YIPF1Q9Y548 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC19.19■□□□□ 0.66
YIPF1Q9Y548 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.19■□□□□ 0.66
YIPF1Q9Y548 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
YIPF1Q9Y548 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC19.19■□□□□ 0.66
YIPF1Q9Y548 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
YIPF1Q9Y548 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
YIPF1Q9Y548 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
YIPF1Q9Y548 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
YIPF1Q9Y548 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC19.19■□□□□ 0.66
YIPF1Q9Y548 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC19.19■□□□□ 0.66
YIPF1Q9Y548 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
YIPF1Q9Y548 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
YIPF1Q9Y548 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
YIPF1Q9Y548 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
YIPF1Q9Y548 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
YIPF1Q9Y548 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
YIPF1Q9Y548 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
YIPF1Q9Y548 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
YIPF1Q9Y548 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
YIPF1Q9Y548 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
YIPF1Q9Y548 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
YIPF1Q9Y548 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC19.18■□□□□ 0.66
YIPF1Q9Y548 AC009078.2-202ENST00000463353 338 ntBASIC19.18■□□□□ 0.66
YIPF1Q9Y548 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.18■□□□□ 0.66
YIPF1Q9Y548 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC19.18■□□□□ 0.66
YIPF1Q9Y548 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC19.18■□□□□ 0.66
YIPF1Q9Y548 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
YIPF1Q9Y548 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
YIPF1Q9Y548 AL353801.3-201ENST00000609898 542 ntBASIC19.18■□□□□ 0.66
YIPF1Q9Y548 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
YIPF1Q9Y548 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
YIPF1Q9Y548 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC19.18■□□□□ 0.66
YIPF1Q9Y548 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
YIPF1Q9Y548 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
YIPF1Q9Y548 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.18■□□□□ 0.66
YIPF1Q9Y548 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.18■□□□□ 0.66
YIPF1Q9Y548 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
YIPF1Q9Y548 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
YIPF1Q9Y548 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
YIPF1Q9Y548 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.17■□□□□ 0.66
YIPF1Q9Y548 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC19.17■□□□□ 0.66
YIPF1Q9Y548 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
YIPF1Q9Y548 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
YIPF1Q9Y548 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
YIPF1Q9Y548 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
YIPF1Q9Y548 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
YIPF1Q9Y548 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
YIPF1Q9Y548 DFFB-203ENST00000341385 572 ntTSL 5 BASIC19.17■□□□□ 0.66
YIPF1Q9Y548 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
YIPF1Q9Y548 MINOS1P3-201ENST00000457048 203 ntBASIC19.17■□□□□ 0.66
YIPF1Q9Y548 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC19.17■□□□□ 0.66
YIPF1Q9Y548 BMF-207ENST00000559701 630 ntTSL 3 BASIC19.17■□□□□ 0.66
YIPF1Q9Y548 AC104692.2-201ENST00000603054 253 ntBASIC19.17■□□□□ 0.66
YIPF1Q9Y548 ANKRD20A8P-203ENST00000641373 517 ntBASIC19.17■□□□□ 0.66
YIPF1Q9Y548 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
YIPF1Q9Y548 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC19.17■□□□□ 0.66
YIPF1Q9Y548 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
YIPF1Q9Y548 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.17■□□□□ 0.66
YIPF1Q9Y548 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
YIPF1Q9Y548 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
YIPF1Q9Y548 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
YIPF1Q9Y548 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
YIPF1Q9Y548 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
YIPF1Q9Y548 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
YIPF1Q9Y548 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.16■□□□□ 0.66
YIPF1Q9Y548 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
YIPF1Q9Y548 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
YIPF1Q9Y548 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC19.16■□□□□ 0.66
YIPF1Q9Y548 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
YIPF1Q9Y548 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
YIPF1Q9Y548 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
YIPF1Q9Y548 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms