Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGB4Q9UN71 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
PCDHGB4Q9UN71 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGB4Q9UN71 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.87■□□□□ 0.45
PCDHGB4Q9UN71 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGB4Q9UN71 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.87■□□□□ 0.45
PCDHGB4Q9UN71 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.87■□□□□ 0.45
PCDHGB4Q9UN71 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGB4Q9UN71 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGB4Q9UN71 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
PCDHGB4Q9UN71 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.87■□□□□ 0.45
PCDHGB4Q9UN71 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
PCDHGB4Q9UN71 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.87■□□□□ 0.45
PCDHGB4Q9UN71 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.87■□□□□ 0.45
PCDHGB4Q9UN71 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGB4Q9UN71 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGB4Q9UN71 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGB4Q9UN71 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.87■□□□□ 0.45
PCDHGB4Q9UN71 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGB4Q9UN71 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.86■□□□□ 0.45
PCDHGB4Q9UN71 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.86■□□□□ 0.45
PCDHGB4Q9UN71 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.86■□□□□ 0.45
PCDHGB4Q9UN71 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.86■□□□□ 0.45
PCDHGB4Q9UN71 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGB4Q9UN71 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.86■□□□□ 0.45
PCDHGB4Q9UN71 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGB4Q9UN71 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.86■□□□□ 0.45
PCDHGB4Q9UN71 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
PCDHGB4Q9UN71 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
PCDHGB4Q9UN71 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGB4Q9UN71 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGB4Q9UN71 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGB4Q9UN71 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGB4Q9UN71 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGB4Q9UN71 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
PCDHGB4Q9UN71 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGB4Q9UN71 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
PCDHGB4Q9UN71 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGB4Q9UN71 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGB4Q9UN71 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
PCDHGB4Q9UN71 AC133681.1-201ENST00000465482 601 ntBASIC17.86■□□□□ 0.45
PCDHGB4Q9UN71 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.86■□□□□ 0.45
PCDHGB4Q9UN71 AP002982.1-201ENST00000492365 877 ntBASIC17.86■□□□□ 0.45
PCDHGB4Q9UN71 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGB4Q9UN71 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC17.86■□□□□ 0.45
PCDHGB4Q9UN71 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGB4Q9UN71 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.86■□□□□ 0.45
PCDHGB4Q9UN71 RN7SL471P-201ENST00000580476 299 ntBASIC17.86■□□□□ 0.45
PCDHGB4Q9UN71 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
PCDHGB4Q9UN71 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.86■□□□□ 0.45
PCDHGB4Q9UN71 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.86■□□□□ 0.45
PCDHGB4Q9UN71 AC124016.1-201ENST00000609552 612 ntBASIC17.86■□□□□ 0.45
PCDHGB4Q9UN71 AL445675.2-201ENST00000620291 557 ntBASIC17.86■□□□□ 0.45
PCDHGB4Q9UN71 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGB4Q9UN71 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.86■□□□□ 0.45
PCDHGB4Q9UN71 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGB4Q9UN71 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGB4Q9UN71 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.86■□□□□ 0.45
PCDHGB4Q9UN71 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGB4Q9UN71 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.86■□□□□ 0.45
PCDHGB4Q9UN71 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
PCDHGB4Q9UN71 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGB4Q9UN71 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGB4Q9UN71 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.86■□□□□ 0.45
PCDHGB4Q9UN71 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.86■□□□□ 0.45
PCDHGB4Q9UN71 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
PCDHGB4Q9UN71 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHGB4Q9UN71 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHGB4Q9UN71 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
PCDHGB4Q9UN71 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.85■□□□□ 0.45
PCDHGB4Q9UN71 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
PCDHGB4Q9UN71 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHGB4Q9UN71 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.85■□□□□ 0.45
PCDHGB4Q9UN71 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.85■□□□□ 0.45
PCDHGB4Q9UN71 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.85■□□□□ 0.45
PCDHGB4Q9UN71 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC17.85■□□□□ 0.45
PCDHGB4Q9UN71 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
PCDHGB4Q9UN71 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.85■□□□□ 0.45
PCDHGB4Q9UN71 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHGB4Q9UN71 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.85■□□□□ 0.45
PCDHGB4Q9UN71 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
PCDHGB4Q9UN71 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHGB4Q9UN71 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC17.85■□□□□ 0.45
PCDHGB4Q9UN71 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.85■□□□□ 0.45
PCDHGB4Q9UN71 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
PCDHGB4Q9UN71 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC17.85■□□□□ 0.45
PCDHGB4Q9UN71 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHGB4Q9UN71 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
PCDHGB4Q9UN71 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
PCDHGB4Q9UN71 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
PCDHGB4Q9UN71 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHGB4Q9UN71 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHGB4Q9UN71 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHGB4Q9UN71 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHGB4Q9UN71 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHGB4Q9UN71 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHGB4Q9UN71 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHGB4Q9UN71 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.84■□□□□ 0.45
PCDHGB4Q9UN71 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.84■□□□□ 0.45
PCDHGB4Q9UN71 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms