Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
LINC00474Q9P2X8 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
LINC00474Q9P2X8 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
LINC00474Q9P2X8 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
LINC00474Q9P2X8 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
LINC00474Q9P2X8 USP39-202ENST00000409025 1946 ntTSL 5 BASIC12.02□□□□□ -0.49
LINC00474Q9P2X8 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC12.02□□□□□ -0.49
LINC00474Q9P2X8 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
LINC00474Q9P2X8 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
LINC00474Q9P2X8 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
LINC00474Q9P2X8 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
LINC00474Q9P2X8 AL512353.2-201ENST00000448759 1962 ntBASIC12.02□□□□□ -0.49
LINC00474Q9P2X8 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
LINC00474Q9P2X8 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
LINC00474Q9P2X8 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
LINC00474Q9P2X8 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.49
LINC00474Q9P2X8 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC12.02□□□□□ -0.49
LINC00474Q9P2X8 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
LINC00474Q9P2X8 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
LINC00474Q9P2X8 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC12.02□□□□□ -0.49
LINC00474Q9P2X8 AC009065.1-201ENST00000564055 1225 ntBASIC12.02□□□□□ -0.49
LINC00474Q9P2X8 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC12.02□□□□□ -0.49
LINC00474Q9P2X8 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
LINC00474Q9P2X8 PCDHB18P-201ENST00000524813 2368 ntBASIC12.02□□□□□ -0.49
LINC00474Q9P2X8 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
LINC00474Q9P2X8 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
LINC00474Q9P2X8 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
LINC00474Q9P2X8 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
LINC00474Q9P2X8 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
LINC00474Q9P2X8 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
LINC00474Q9P2X8 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
LINC00474Q9P2X8 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
LINC00474Q9P2X8 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
LINC00474Q9P2X8 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
LINC00474Q9P2X8 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC12.02□□□□□ -0.49
LINC00474Q9P2X8 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
LINC00474Q9P2X8 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC12.02□□□□□ -0.49
LINC00474Q9P2X8 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
LINC00474Q9P2X8 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
LINC00474Q9P2X8 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
LINC00474Q9P2X8 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
LINC00474Q9P2X8 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
LINC00474Q9P2X8 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
LINC00474Q9P2X8 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC12.01□□□□□ -0.49
LINC00474Q9P2X8 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
LINC00474Q9P2X8 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
LINC00474Q9P2X8 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
LINC00474Q9P2X8 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC12.01□□□□□ -0.49
LINC00474Q9P2X8 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
LINC00474Q9P2X8 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
LINC00474Q9P2X8 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
LINC00474Q9P2X8 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC12.01□□□□□ -0.49
LINC00474Q9P2X8 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
LINC00474Q9P2X8 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
LINC00474Q9P2X8 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
LINC00474Q9P2X8 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
LINC00474Q9P2X8 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
LINC00474Q9P2X8 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
LINC00474Q9P2X8 FDX2-206ENST00000492239 773 ntTSL 2 BASIC12.01□□□□□ -0.49
LINC00474Q9P2X8 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
LINC00474Q9P2X8 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
LINC00474Q9P2X8 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
LINC00474Q9P2X8 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC12.01□□□□□ -0.49
LINC00474Q9P2X8 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
LINC00474Q9P2X8 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
LINC00474Q9P2X8 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
LINC00474Q9P2X8 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC12.01□□□□□ -0.49
LINC00474Q9P2X8 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
LINC00474Q9P2X8 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC12.01□□□□□ -0.49
LINC00474Q9P2X8 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC12.01□□□□□ -0.49
LINC00474Q9P2X8 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
LINC00474Q9P2X8 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
LINC00474Q9P2X8 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
LINC00474Q9P2X8 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
LINC00474Q9P2X8 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC12.01□□□□□ -0.49
LINC00474Q9P2X8 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
LINC00474Q9P2X8 KRT8P7-201ENST00000533003 1432 ntBASIC12.01□□□□□ -0.49
LINC00474Q9P2X8 KRT8P32-201ENST00000512863 1461 ntBASIC12.01□□□□□ -0.49
LINC00474Q9P2X8 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC12.01□□□□□ -0.49
LINC00474Q9P2X8 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
LINC00474Q9P2X8 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
LINC00474Q9P2X8 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC12.01□□□□□ -0.49
LINC00474Q9P2X8 ADK-206ENST00000541550 2222 ntTSL 2 BASIC12.01□□□□□ -0.49
LINC00474Q9P2X8 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
LINC00474Q9P2X8 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC12□□□□□ -0.49
LINC00474Q9P2X8 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
LINC00474Q9P2X8 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC12□□□□□ -0.49
LINC00474Q9P2X8 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
LINC00474Q9P2X8 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC12□□□□□ -0.49
LINC00474Q9P2X8 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
LINC00474Q9P2X8 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
LINC00474Q9P2X8 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
LINC00474Q9P2X8 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
LINC00474Q9P2X8 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
LINC00474Q9P2X8 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
LINC00474Q9P2X8 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC12□□□□□ -0.49
LINC00474Q9P2X8 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC12□□□□□ -0.49
LINC00474Q9P2X8 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC12□□□□□ -0.49
LINC00474Q9P2X8 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
LINC00474Q9P2X8 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC12□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms