Protein–RNA interactions for Protein: Q9HB58

SP110, Sp110 nuclear body protein, humanhuman

Predictions only

Length 689 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP110Q9HB58 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18.86■□□□□ 0.61
SP110Q9HB58 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.86■□□□□ 0.61
SP110Q9HB58 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SP110Q9HB58 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.86■□□□□ 0.61
SP110Q9HB58 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SP110Q9HB58 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SP110Q9HB58 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.86■□□□□ 0.61
SP110Q9HB58 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.86■□□□□ 0.61
SP110Q9HB58 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
SP110Q9HB58 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SP110Q9HB58 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SP110Q9HB58 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
SP110Q9HB58 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SP110Q9HB58 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SP110Q9HB58 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SP110Q9HB58 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
SP110Q9HB58 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.85■□□□□ 0.61
SP110Q9HB58 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SP110Q9HB58 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.85■□□□□ 0.61
SP110Q9HB58 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.85■□□□□ 0.61
SP110Q9HB58 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.85■□□□□ 0.61
SP110Q9HB58 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SP110Q9HB58 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.85■□□□□ 0.61
SP110Q9HB58 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SP110Q9HB58 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SP110Q9HB58 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC18.85■□□□□ 0.61
SP110Q9HB58 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SP110Q9HB58 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
SP110Q9HB58 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SP110Q9HB58 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC18.85■□□□□ 0.61
SP110Q9HB58 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SP110Q9HB58 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.85■□□□□ 0.61
SP110Q9HB58 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SP110Q9HB58 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
SP110Q9HB58 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.85■□□□□ 0.61
SP110Q9HB58 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SP110Q9HB58 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.85■□□□□ 0.61
SP110Q9HB58 MIR3180-4-201ENST00000582223 153 ntBASIC18.85■□□□□ 0.61
SP110Q9HB58 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
SP110Q9HB58 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.85■□□□□ 0.61
SP110Q9HB58 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.85■□□□□ 0.61
SP110Q9HB58 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SP110Q9HB58 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SP110Q9HB58 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SP110Q9HB58 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SP110Q9HB58 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SP110Q9HB58 AC099343.3-201ENST00000605834 2503 ntBASIC18.84■□□□□ 0.61
SP110Q9HB58 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SP110Q9HB58 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SP110Q9HB58 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.84■□□□□ 0.61
SP110Q9HB58 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
SP110Q9HB58 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
SP110Q9HB58 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.84■□□□□ 0.61
SP110Q9HB58 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SP110Q9HB58 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SP110Q9HB58 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SP110Q9HB58 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SP110Q9HB58 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.84■□□□□ 0.61
SP110Q9HB58 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SP110Q9HB58 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SP110Q9HB58 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC18.84■□□□□ 0.61
SP110Q9HB58 RNF152P1-201ENST00000397754 604 ntBASIC18.84■□□□□ 0.61
SP110Q9HB58 FAM210CP-201ENST00000445714 574 ntBASIC18.84■□□□□ 0.61
SP110Q9HB58 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.84■□□□□ 0.61
SP110Q9HB58 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC18.84■□□□□ 0.61
SP110Q9HB58 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SP110Q9HB58 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SP110Q9HB58 MIR3917-201ENST00000580971 93 ntBASIC18.84■□□□□ 0.61
SP110Q9HB58 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18.84■□□□□ 0.61
SP110Q9HB58 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SP110Q9HB58 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SP110Q9HB58 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SP110Q9HB58 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SP110Q9HB58 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SP110Q9HB58 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SP110Q9HB58 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SP110Q9HB58 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SP110Q9HB58 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.84■□□□□ 0.61
SP110Q9HB58 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SP110Q9HB58 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SP110Q9HB58 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SP110Q9HB58 AC009102.3-201ENST00000623118 1491 ntBASIC18.84■□□□□ 0.61
SP110Q9HB58 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SP110Q9HB58 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SP110Q9HB58 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SP110Q9HB58 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SP110Q9HB58 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
SP110Q9HB58 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SP110Q9HB58 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
SP110Q9HB58 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SP110Q9HB58 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SP110Q9HB58 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SP110Q9HB58 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
SP110Q9HB58 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SP110Q9HB58 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SP110Q9HB58 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SP110Q9HB58 MIR149-201ENST00000384879 89 ntBASIC18.83■□□□□ 0.6
SP110Q9HB58 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SP110Q9HB58 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SP110Q9HB58 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms