Protein–RNA interactions for Protein: Q9GZU7

CTDSP1, Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1Q9GZU7 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CTDSP1Q9GZU7 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CTDSP1Q9GZU7 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CTDSP1Q9GZU7 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CTDSP1Q9GZU7 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CTDSP1Q9GZU7 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
CTDSP1Q9GZU7 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CTDSP1Q9GZU7 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC14.21□□□□□ -0.13
CTDSP1Q9GZU7 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC14.21□□□□□ -0.13
CTDSP1Q9GZU7 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
CTDSP1Q9GZU7 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
CTDSP1Q9GZU7 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CTDSP1Q9GZU7 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CTDSP1Q9GZU7 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
CTDSP1Q9GZU7 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CTDSP1Q9GZU7 HEIH-201ENST00000623091 1652 ntBASIC14.21□□□□□ -0.13
CTDSP1Q9GZU7 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CTDSP1Q9GZU7 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
CTDSP1Q9GZU7 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CTDSP1Q9GZU7 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CTDSP1Q9GZU7 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CTDSP1Q9GZU7 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC14.21□□□□□ -0.13
CTDSP1Q9GZU7 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CTDSP1Q9GZU7 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC14.21□□□□□ -0.13
CTDSP1Q9GZU7 AC023632.3-201ENST00000521633 145 ntBASIC14.21□□□□□ -0.13
CTDSP1Q9GZU7 KRT18P20-201ENST00000548986 1279 ntBASIC14.21□□□□□ -0.13
CTDSP1Q9GZU7 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC14.21□□□□□ -0.13
CTDSP1Q9GZU7 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC14.21□□□□□ -0.13
CTDSP1Q9GZU7 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
CTDSP1Q9GZU7 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CTDSP1Q9GZU7 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
CTDSP1Q9GZU7 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CTDSP1Q9GZU7 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
CTDSP1Q9GZU7 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CTDSP1Q9GZU7 AC112777.1-201ENST00000540175 1423 ntBASIC14.21□□□□□ -0.13
CTDSP1Q9GZU7 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
CTDSP1Q9GZU7 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CTDSP1Q9GZU7 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CTDSP1Q9GZU7 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.14
CTDSP1Q9GZU7 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CTDSP1Q9GZU7 ABR-203ENST00000536794 2213 ntTSL 2 BASIC14.21□□□□□ -0.14
CTDSP1Q9GZU7 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CTDSP1Q9GZU7 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
CTDSP1Q9GZU7 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CTDSP1Q9GZU7 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CTDSP1Q9GZU7 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CTDSP1Q9GZU7 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CTDSP1Q9GZU7 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
CTDSP1Q9GZU7 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CTDSP1Q9GZU7 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CTDSP1Q9GZU7 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CTDSP1Q9GZU7 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CTDSP1Q9GZU7 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CTDSP1Q9GZU7 FLJ38576-201ENST00000623820 2459 ntBASIC14.2□□□□□ -0.14
CTDSP1Q9GZU7 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC14.2□□□□□ -0.14
CTDSP1Q9GZU7 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC14.2□□□□□ -0.14
CTDSP1Q9GZU7 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC14.2□□□□□ -0.14
CTDSP1Q9GZU7 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
CTDSP1Q9GZU7 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CTDSP1Q9GZU7 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC14.2□□□□□ -0.14
CTDSP1Q9GZU7 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
CTDSP1Q9GZU7 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CTDSP1Q9GZU7 PCDHA1-201ENST00000378133 2726 ntBASIC14.2□□□□□ -0.14
CTDSP1Q9GZU7 ANKRD26P3-201ENST00000454044 2748 ntBASIC14.2□□□□□ -0.14
CTDSP1Q9GZU7 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CTDSP1Q9GZU7 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CTDSP1Q9GZU7 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CTDSP1Q9GZU7 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CTDSP1Q9GZU7 PTMA-205ENST00000410064 814 ntTSL 2 BASIC14.2□□□□□ -0.14
CTDSP1Q9GZU7 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC14.2□□□□□ -0.14
CTDSP1Q9GZU7 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC14.2□□□□□ -0.14
CTDSP1Q9GZU7 CREM-229ENST00000474362 1030 ntTSL 2 BASIC14.2□□□□□ -0.14
CTDSP1Q9GZU7 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC14.2□□□□□ -0.14
CTDSP1Q9GZU7 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CTDSP1Q9GZU7 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC14.2□□□□□ -0.14
CTDSP1Q9GZU7 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CTDSP1Q9GZU7 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC14.2□□□□□ -0.14
CTDSP1Q9GZU7 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CTDSP1Q9GZU7 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CTDSP1Q9GZU7 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC14.2□□□□□ -0.14
CTDSP1Q9GZU7 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CTDSP1Q9GZU7 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CTDSP1Q9GZU7 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CTDSP1Q9GZU7 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CTDSP1Q9GZU7 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
CTDSP1Q9GZU7 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CTDSP1Q9GZU7 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CTDSP1Q9GZU7 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CTDSP1Q9GZU7 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CTDSP1Q9GZU7 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
CTDSP1Q9GZU7 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CTDSP1Q9GZU7 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CTDSP1Q9GZU7 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
CTDSP1Q9GZU7 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CTDSP1Q9GZU7 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CTDSP1Q9GZU7 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
CTDSP1Q9GZU7 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CTDSP1Q9GZU7 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC14.19□□□□□ -0.14
CTDSP1Q9GZU7 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CTDSP1Q9GZU7 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms