Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC10.99□□□□□ -0.65
LIMD2Q9BT23 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC10.99□□□□□ -0.65
LIMD2Q9BT23 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
LIMD2Q9BT23 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
LIMD2Q9BT23 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC10.99□□□□□ -0.65
LIMD2Q9BT23 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC10.99□□□□□ -0.65
LIMD2Q9BT23 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC10.99□□□□□ -0.65
LIMD2Q9BT23 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
LIMD2Q9BT23 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC10.99□□□□□ -0.65
LIMD2Q9BT23 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
LIMD2Q9BT23 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC10.99□□□□□ -0.65
LIMD2Q9BT23 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC10.99□□□□□ -0.65
LIMD2Q9BT23 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
LIMD2Q9BT23 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
LIMD2Q9BT23 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC10.99□□□□□ -0.65
LIMD2Q9BT23 KRT16P1-201ENST00000399124 1418 ntBASIC10.99□□□□□ -0.65
LIMD2Q9BT23 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC10.99□□□□□ -0.65
LIMD2Q9BT23 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
LIMD2Q9BT23 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC10.99□□□□□ -0.65
LIMD2Q9BT23 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
LIMD2Q9BT23 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
LIMD2Q9BT23 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
LIMD2Q9BT23 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC10.98□□□□□ -0.65
LIMD2Q9BT23 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
LIMD2Q9BT23 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
LIMD2Q9BT23 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
LIMD2Q9BT23 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
LIMD2Q9BT23 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
LIMD2Q9BT23 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
LIMD2Q9BT23 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC10.98□□□□□ -0.65
LIMD2Q9BT23 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
LIMD2Q9BT23 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC10.98□□□□□ -0.65
LIMD2Q9BT23 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
LIMD2Q9BT23 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
LIMD2Q9BT23 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC10.98□□□□□ -0.65
LIMD2Q9BT23 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
LIMD2Q9BT23 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
LIMD2Q9BT23 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
LIMD2Q9BT23 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
LIMD2Q9BT23 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
LIMD2Q9BT23 SERF2-207ENST00000409614 582 ntTSL 2 BASIC10.98□□□□□ -0.65
LIMD2Q9BT23 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC10.98□□□□□ -0.65
LIMD2Q9BT23 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
LIMD2Q9BT23 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
LIMD2Q9BT23 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC10.98□□□□□ -0.65
LIMD2Q9BT23 RARRES2P10-201ENST00000564312 460 ntBASIC10.98□□□□□ -0.65
LIMD2Q9BT23 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC10.98□□□□□ -0.65
LIMD2Q9BT23 AP001412.1-201ENST00000608405 714 ntBASIC10.98□□□□□ -0.65
LIMD2Q9BT23 AL031985.4-201ENST00000642138 673 ntBASIC10.98□□□□□ -0.65
LIMD2Q9BT23 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC10.98□□□□□ -0.65
LIMD2Q9BT23 HTR7P1-201ENST00000538670 1336 ntBASIC10.98□□□□□ -0.65
LIMD2Q9BT23 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
LIMD2Q9BT23 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
LIMD2Q9BT23 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC10.98□□□□□ -0.65
LIMD2Q9BT23 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
LIMD2Q9BT23 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
LIMD2Q9BT23 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
LIMD2Q9BT23 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC10.98□□□□□ -0.65
LIMD2Q9BT23 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC10.98□□□□□ -0.65
LIMD2Q9BT23 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC10.98□□□□□ -0.65
LIMD2Q9BT23 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
LIMD2Q9BT23 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
LIMD2Q9BT23 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
LIMD2Q9BT23 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
LIMD2Q9BT23 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC10.97□□□□□ -0.65
LIMD2Q9BT23 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC10.97□□□□□ -0.65
LIMD2Q9BT23 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
LIMD2Q9BT23 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
LIMD2Q9BT23 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
LIMD2Q9BT23 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LIMD2Q9BT23 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LIMD2Q9BT23 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC10.97□□□□□ -0.65
LIMD2Q9BT23 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC10.97□□□□□ -0.65
LIMD2Q9BT23 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC10.97□□□□□ -0.65
LIMD2Q9BT23 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC10.97□□□□□ -0.65
LIMD2Q9BT23 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LIMD2Q9BT23 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
LIMD2Q9BT23 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LIMD2Q9BT23 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
LIMD2Q9BT23 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
LIMD2Q9BT23 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
LIMD2Q9BT23 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
LIMD2Q9BT23 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
LIMD2Q9BT23 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
LIMD2Q9BT23 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC10.97□□□□□ -0.65
LIMD2Q9BT23 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC10.97□□□□□ -0.65
LIMD2Q9BT23 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC10.97□□□□□ -0.65
LIMD2Q9BT23 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC10.97□□□□□ -0.65
LIMD2Q9BT23 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC10.97□□□□□ -0.65
LIMD2Q9BT23 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC10.97□□□□□ -0.65
LIMD2Q9BT23 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC10.97□□□□□ -0.65
LIMD2Q9BT23 AC233263.1-201ENST00000578059 224 ntBASIC10.97□□□□□ -0.65
LIMD2Q9BT23 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC10.97□□□□□ -0.65
LIMD2Q9BT23 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
LIMD2Q9BT23 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LIMD2Q9BT23 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
LIMD2Q9BT23 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
LIMD2Q9BT23 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
LIMD2Q9BT23 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LIMD2Q9BT23 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms