Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NR1H4Q96RI1 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC17.36■□□□□ 0.37
NR1H4Q96RI1 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NR1H4Q96RI1 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC17.36■□□□□ 0.37
NR1H4Q96RI1 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC17.36■□□□□ 0.37
NR1H4Q96RI1 KRT18P14-201ENST00000534205 1250 ntBASIC17.36■□□□□ 0.37
NR1H4Q96RI1 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC17.36■□□□□ 0.37
NR1H4Q96RI1 CCDC92B-201ENST00000575506 885 ntBASIC17.36■□□□□ 0.37
NR1H4Q96RI1 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NR1H4Q96RI1 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC17.36■□□□□ 0.37
NR1H4Q96RI1 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC17.36■□□□□ 0.37
NR1H4Q96RI1 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC17.36■□□□□ 0.37
NR1H4Q96RI1 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.36■□□□□ 0.37
NR1H4Q96RI1 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NR1H4Q96RI1 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
NR1H4Q96RI1 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
NR1H4Q96RI1 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
NR1H4Q96RI1 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
NR1H4Q96RI1 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NR1H4Q96RI1 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
NR1H4Q96RI1 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NR1H4Q96RI1 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NR1H4Q96RI1 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NR1H4Q96RI1 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NR1H4Q96RI1 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NR1H4Q96RI1 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
NR1H4Q96RI1 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NR1H4Q96RI1 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NR1H4Q96RI1 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.35■□□□□ 0.37
NR1H4Q96RI1 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NR1H4Q96RI1 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
NR1H4Q96RI1 AL499627.1-201ENST00000569373 2188 ntBASIC17.35■□□□□ 0.37
NR1H4Q96RI1 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NR1H4Q96RI1 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NR1H4Q96RI1 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NR1H4Q96RI1 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NR1H4Q96RI1 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
NR1H4Q96RI1 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC17.35■□□□□ 0.37
NR1H4Q96RI1 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
NR1H4Q96RI1 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NR1H4Q96RI1 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NR1H4Q96RI1 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NR1H4Q96RI1 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NR1H4Q96RI1 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NR1H4Q96RI1 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC17.35■□□□□ 0.37
NR1H4Q96RI1 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
NR1H4Q96RI1 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NR1H4Q96RI1 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
NR1H4Q96RI1 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NR1H4Q96RI1 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NR1H4Q96RI1 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.35■□□□□ 0.37
NR1H4Q96RI1 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NR1H4Q96RI1 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
NR1H4Q96RI1 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.34■□□□□ 0.37
NR1H4Q96RI1 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
NR1H4Q96RI1 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NR1H4Q96RI1 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
NR1H4Q96RI1 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NR1H4Q96RI1 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NR1H4Q96RI1 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NR1H4Q96RI1 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NR1H4Q96RI1 PCDHA1-201ENST00000378133 2726 ntBASIC17.34■□□□□ 0.37
NR1H4Q96RI1 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
NR1H4Q96RI1 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NR1H4Q96RI1 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NR1H4Q96RI1 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
NR1H4Q96RI1 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NR1H4Q96RI1 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NR1H4Q96RI1 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC17.34■□□□□ 0.37
NR1H4Q96RI1 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
NR1H4Q96RI1 AC004854.2-201ENST00000608450 1441 ntBASIC17.34■□□□□ 0.37
NR1H4Q96RI1 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.34■□□□□ 0.37
NR1H4Q96RI1 RAB43-208ENST00000615093 783 ntTSL 5 BASIC17.34■□□□□ 0.37
NR1H4Q96RI1 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.34■□□□□ 0.37
NR1H4Q96RI1 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NR1H4Q96RI1 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NR1H4Q96RI1 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
NR1H4Q96RI1 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
NR1H4Q96RI1 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
NR1H4Q96RI1 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NR1H4Q96RI1 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
NR1H4Q96RI1 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NR1H4Q96RI1 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NR1H4Q96RI1 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
NR1H4Q96RI1 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.33■□□□□ 0.37
NR1H4Q96RI1 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.33■□□□□ 0.37
NR1H4Q96RI1 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NR1H4Q96RI1 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
NR1H4Q96RI1 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.33■□□□□ 0.36
NR1H4Q96RI1 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
NR1H4Q96RI1 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.33■□□□□ 0.36
NR1H4Q96RI1 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
NR1H4Q96RI1 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC17.33■□□□□ 0.36
NR1H4Q96RI1 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
NR1H4Q96RI1 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.33■□□□□ 0.36
NR1H4Q96RI1 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC17.33■□□□□ 0.36
NR1H4Q96RI1 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC17.33■□□□□ 0.36
NR1H4Q96RI1 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC17.33■□□□□ 0.36
NR1H4Q96RI1 MYC-208ENST00000641036 567 ntBASIC17.33■□□□□ 0.36
NR1H4Q96RI1 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms