Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SYNGAP1Q96PV0 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SYNGAP1Q96PV0 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
SYNGAP1Q96PV0 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SYNGAP1Q96PV0 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SYNGAP1Q96PV0 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC20.89■□□□□ 0.93
SYNGAP1Q96PV0 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC20.89■□□□□ 0.93
SYNGAP1Q96PV0 CALM3-211ENST00000598871 561 ntTSL 4 BASIC20.89■□□□□ 0.93
SYNGAP1Q96PV0 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC20.89■□□□□ 0.93
SYNGAP1Q96PV0 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SYNGAP1Q96PV0 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
SYNGAP1Q96PV0 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SYNGAP1Q96PV0 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SYNGAP1Q96PV0 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.89■□□□□ 0.93
SYNGAP1Q96PV0 AL353692.3-201ENST00000407031 1396 ntBASIC20.89■□□□□ 0.93
SYNGAP1Q96PV0 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SYNGAP1Q96PV0 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SYNGAP1Q96PV0 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC20.89■□□□□ 0.93
SYNGAP1Q96PV0 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC20.89■□□□□ 0.93
SYNGAP1Q96PV0 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.89■□□□□ 0.93
SYNGAP1Q96PV0 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC20.89■□□□□ 0.93
SYNGAP1Q96PV0 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SYNGAP1Q96PV0 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.88■□□□□ 0.93
SYNGAP1Q96PV0 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.88■□□□□ 0.93
SYNGAP1Q96PV0 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SYNGAP1Q96PV0 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SYNGAP1Q96PV0 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SYNGAP1Q96PV0 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SYNGAP1Q96PV0 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
SYNGAP1Q96PV0 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
SYNGAP1Q96PV0 CDV3-207ENST00000508481 661 ntTSL 3 BASIC20.88■□□□□ 0.93
SYNGAP1Q96PV0 ABR-204ENST00000543210 1049 ntTSL 2 BASIC20.88■□□□□ 0.93
SYNGAP1Q96PV0 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SYNGAP1Q96PV0 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SYNGAP1Q96PV0 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC20.88■□□□□ 0.93
SYNGAP1Q96PV0 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC20.88■□□□□ 0.93
SYNGAP1Q96PV0 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SYNGAP1Q96PV0 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC20.88■□□□□ 0.93
SYNGAP1Q96PV0 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC20.88■□□□□ 0.93
SYNGAP1Q96PV0 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.88■□□□□ 0.93
SYNGAP1Q96PV0 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.88■□□□□ 0.93
SYNGAP1Q96PV0 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC20.88■□□□□ 0.93
SYNGAP1Q96PV0 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SYNGAP1Q96PV0 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SYNGAP1Q96PV0 KRT8P50-201ENST00000562022 1438 ntBASIC20.88■□□□□ 0.93
SYNGAP1Q96PV0 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
SYNGAP1Q96PV0 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
SYNGAP1Q96PV0 NSUN5P1-202ENST00000421140 1535 ntBASIC20.88■□□□□ 0.93
SYNGAP1Q96PV0 NSUN5P2-203ENST00000457352 1529 ntBASIC20.88■□□□□ 0.93
SYNGAP1Q96PV0 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SYNGAP1Q96PV0 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
SYNGAP1Q96PV0 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SYNGAP1Q96PV0 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
SYNGAP1Q96PV0 HEIH-201ENST00000623091 1652 ntBASIC20.88■□□□□ 0.93
SYNGAP1Q96PV0 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SYNGAP1Q96PV0 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SYNGAP1Q96PV0 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SYNGAP1Q96PV0 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC20.87■□□□□ 0.93
SYNGAP1Q96PV0 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SYNGAP1Q96PV0 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SYNGAP1Q96PV0 AL022342.1-201ENST00000400363 863 ntBASIC20.87■□□□□ 0.93
SYNGAP1Q96PV0 KRT18P41-201ENST00000518924 1277 ntBASIC20.87■□□□□ 0.93
SYNGAP1Q96PV0 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC20.87■□□□□ 0.93
SYNGAP1Q96PV0 AP005901.3-202ENST00000581653 237 ntBASIC20.87■□□□□ 0.93
SYNGAP1Q96PV0 CCNC-219ENST00000627680 896 ntTSL 5 BASIC20.87■□□□□ 0.93
SYNGAP1Q96PV0 VPS51-217ENST00000639871 243 ntTSL 5 BASIC20.87■□□□□ 0.93
SYNGAP1Q96PV0 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.87■□□□□ 0.93
SYNGAP1Q96PV0 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SYNGAP1Q96PV0 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SYNGAP1Q96PV0 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SYNGAP1Q96PV0 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SYNGAP1Q96PV0 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SYNGAP1Q96PV0 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
SYNGAP1Q96PV0 RNF165-205ENST00000588679 2904 ntBASIC20.87■□□□□ 0.93
SYNGAP1Q96PV0 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SYNGAP1Q96PV0 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SYNGAP1Q96PV0 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.86■□□□□ 0.93
SYNGAP1Q96PV0 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SYNGAP1Q96PV0 AKR1C7P-201ENST00000305623 895 ntBASIC20.86■□□□□ 0.93
SYNGAP1Q96PV0 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SYNGAP1Q96PV0 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC20.86■□□□□ 0.93
SYNGAP1Q96PV0 ABR-217ENST00000572441 563 ntTSL 4 BASIC20.86■□□□□ 0.93
SYNGAP1Q96PV0 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SYNGAP1Q96PV0 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SYNGAP1Q96PV0 MTMR9LP-203ENST00000426597 1545 ntBASIC20.86■□□□□ 0.93
SYNGAP1Q96PV0 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SYNGAP1Q96PV0 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SYNGAP1Q96PV0 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC20.86■□□□□ 0.93
SYNGAP1Q96PV0 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
SYNGAP1Q96PV0 AC098818.2-201ENST00000564925 2320 ntBASIC20.86■□□□□ 0.93
SYNGAP1Q96PV0 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SYNGAP1Q96PV0 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SYNGAP1Q96PV0 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SYNGAP1Q96PV0 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SYNGAP1Q96PV0 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SYNGAP1Q96PV0 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SYNGAP1Q96PV0 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
SYNGAP1Q96PV0 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SYNGAP1Q96PV0 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SYNGAP1Q96PV0 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms