Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.38■□□□□ 0.53
ECHDC3Q96DC8 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ECHDC3Q96DC8 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
ECHDC3Q96DC8 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ECHDC3Q96DC8 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
ECHDC3Q96DC8 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ECHDC3Q96DC8 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ECHDC3Q96DC8 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ECHDC3Q96DC8 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ECHDC3Q96DC8 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ECHDC3Q96DC8 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ECHDC3Q96DC8 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
ECHDC3Q96DC8 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ECHDC3Q96DC8 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ECHDC3Q96DC8 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ECHDC3Q96DC8 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.37■□□□□ 0.53
ECHDC3Q96DC8 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
ECHDC3Q96DC8 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ECHDC3Q96DC8 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.37■□□□□ 0.53
ECHDC3Q96DC8 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ECHDC3Q96DC8 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.37■□□□□ 0.53
ECHDC3Q96DC8 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.37■□□□□ 0.53
ECHDC3Q96DC8 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC18.37■□□□□ 0.53
ECHDC3Q96DC8 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
ECHDC3Q96DC8 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
ECHDC3Q96DC8 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ECHDC3Q96DC8 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC18.37■□□□□ 0.53
ECHDC3Q96DC8 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC18.37■□□□□ 0.53
ECHDC3Q96DC8 AL390719.2-201ENST00000606993 987 ntBASIC18.37■□□□□ 0.53
ECHDC3Q96DC8 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
ECHDC3Q96DC8 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
ECHDC3Q96DC8 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.37■□□□□ 0.53
ECHDC3Q96DC8 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC18.37■□□□□ 0.53
ECHDC3Q96DC8 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ECHDC3Q96DC8 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.37■□□□□ 0.53
ECHDC3Q96DC8 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ECHDC3Q96DC8 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
ECHDC3Q96DC8 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.37■□□□□ 0.53
ECHDC3Q96DC8 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ECHDC3Q96DC8 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ECHDC3Q96DC8 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
ECHDC3Q96DC8 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
ECHDC3Q96DC8 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.37■□□□□ 0.53
ECHDC3Q96DC8 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.37■□□□□ 0.53
ECHDC3Q96DC8 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
ECHDC3Q96DC8 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ECHDC3Q96DC8 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ECHDC3Q96DC8 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.37■□□□□ 0.53
ECHDC3Q96DC8 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ECHDC3Q96DC8 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.37■□□□□ 0.53
ECHDC3Q96DC8 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ECHDC3Q96DC8 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
ECHDC3Q96DC8 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ECHDC3Q96DC8 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ECHDC3Q96DC8 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ECHDC3Q96DC8 BAALC-202ENST00000306391 243 ntTSL 5 BASIC18.36■□□□□ 0.53
ECHDC3Q96DC8 BAALC-204ENST00000330955 222 ntTSL 5 BASIC18.36■□□□□ 0.53
ECHDC3Q96DC8 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ECHDC3Q96DC8 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ECHDC3Q96DC8 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.36■□□□□ 0.53
ECHDC3Q96DC8 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.36■□□□□ 0.53
ECHDC3Q96DC8 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.36■□□□□ 0.53
ECHDC3Q96DC8 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.36■□□□□ 0.53
ECHDC3Q96DC8 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.36■□□□□ 0.53
ECHDC3Q96DC8 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ECHDC3Q96DC8 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ECHDC3Q96DC8 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.36■□□□□ 0.53
ECHDC3Q96DC8 AC005332.3-201ENST00000589904 676 ntBASIC18.36■□□□□ 0.53
ECHDC3Q96DC8 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.36■□□□□ 0.53
ECHDC3Q96DC8 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ECHDC3Q96DC8 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC18.36■□□□□ 0.53
ECHDC3Q96DC8 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
ECHDC3Q96DC8 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ECHDC3Q96DC8 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
ECHDC3Q96DC8 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.36■□□□□ 0.53
ECHDC3Q96DC8 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ECHDC3Q96DC8 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
ECHDC3Q96DC8 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ECHDC3Q96DC8 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ECHDC3Q96DC8 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.35■□□□□ 0.53
ECHDC3Q96DC8 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ECHDC3Q96DC8 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.35■□□□□ 0.53
ECHDC3Q96DC8 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ECHDC3Q96DC8 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
ECHDC3Q96DC8 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ECHDC3Q96DC8 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ECHDC3Q96DC8 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ECHDC3Q96DC8 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ECHDC3Q96DC8 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ECHDC3Q96DC8 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ECHDC3Q96DC8 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
ECHDC3Q96DC8 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC18.35■□□□□ 0.53
ECHDC3Q96DC8 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ECHDC3Q96DC8 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ECHDC3Q96DC8 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC18.35■□□□□ 0.53
ECHDC3Q96DC8 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC18.35■□□□□ 0.53
ECHDC3Q96DC8 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.35■□□□□ 0.53
ECHDC3Q96DC8 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC18.35■□□□□ 0.53
ECHDC3Q96DC8 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.35■□□□□ 0.53
ECHDC3Q96DC8 GPR32P1-201ENST00000601788 811 ntBASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms