Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PPP4R3AQ6IN85 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC20.91■□□□□ 0.94
PPP4R3AQ6IN85 SPDYE15P-201ENST00000424157 909 ntBASIC20.91■□□□□ 0.94
PPP4R3AQ6IN85 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC20.91■□□□□ 0.94
PPP4R3AQ6IN85 AC022616.7-201ENST00000525383 220 ntBASIC20.91■□□□□ 0.94
PPP4R3AQ6IN85 EML3-217ENST00000531557 2509 ntTSL 5 BASIC20.91■□□□□ 0.94
PPP4R3AQ6IN85 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
PPP4R3AQ6IN85 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC20.91■□□□□ 0.94
PPP4R3AQ6IN85 AC009102.3-201ENST00000623118 1491 ntBASIC20.91■□□□□ 0.94
PPP4R3AQ6IN85 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
PPP4R3AQ6IN85 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
PPP4R3AQ6IN85 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
PPP4R3AQ6IN85 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC20.9■□□□□ 0.94
PPP4R3AQ6IN85 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PPP4R3AQ6IN85 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
PPP4R3AQ6IN85 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PPP4R3AQ6IN85 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC20.9■□□□□ 0.94
PPP4R3AQ6IN85 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC20.9■□□□□ 0.94
PPP4R3AQ6IN85 UROS-202ENST00000368778 1556 ntTSL 2 BASIC20.9■□□□□ 0.94
PPP4R3AQ6IN85 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PPP4R3AQ6IN85 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PPP4R3AQ6IN85 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC20.9■□□□□ 0.94
PPP4R3AQ6IN85 KRT18P38-201ENST00000449496 1282 ntBASIC20.9■□□□□ 0.94
PPP4R3AQ6IN85 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC20.9■□□□□ 0.94
PPP4R3AQ6IN85 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC20.9■□□□□ 0.94
PPP4R3AQ6IN85 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PPP4R3AQ6IN85 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PPP4R3AQ6IN85 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC20.9■□□□□ 0.94
PPP4R3AQ6IN85 AC005082.1-201ENST00000413042 2259 ntBASIC20.9■□□□□ 0.94
PPP4R3AQ6IN85 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
PPP4R3AQ6IN85 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PPP4R3AQ6IN85 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC20.9■□□□□ 0.94
PPP4R3AQ6IN85 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC20.9■□□□□ 0.94
PPP4R3AQ6IN85 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC20.89■□□□□ 0.94
PPP4R3AQ6IN85 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
PPP4R3AQ6IN85 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
PPP4R3AQ6IN85 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PPP4R3AQ6IN85 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
PPP4R3AQ6IN85 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
PPP4R3AQ6IN85 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PPP4R3AQ6IN85 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
PPP4R3AQ6IN85 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PPP4R3AQ6IN85 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
PPP4R3AQ6IN85 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
PPP4R3AQ6IN85 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC20.89■□□□□ 0.93
PPP4R3AQ6IN85 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC20.89■□□□□ 0.93
PPP4R3AQ6IN85 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PPP4R3AQ6IN85 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PPP4R3AQ6IN85 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC20.89■□□□□ 0.93
PPP4R3AQ6IN85 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC20.89■□□□□ 0.93
PPP4R3AQ6IN85 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC20.89■□□□□ 0.93
PPP4R3AQ6IN85 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PPP4R3AQ6IN85 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PPP4R3AQ6IN85 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC20.89■□□□□ 0.93
PPP4R3AQ6IN85 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PPP4R3AQ6IN85 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PPP4R3AQ6IN85 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PPP4R3AQ6IN85 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC20.89■□□□□ 0.93
PPP4R3AQ6IN85 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PPP4R3AQ6IN85 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PPP4R3AQ6IN85 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PPP4R3AQ6IN85 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
PPP4R3AQ6IN85 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PPP4R3AQ6IN85 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PPP4R3AQ6IN85 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PPP4R3AQ6IN85 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PPP4R3AQ6IN85 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PPP4R3AQ6IN85 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
PPP4R3AQ6IN85 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PPP4R3AQ6IN85 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC20.88■□□□□ 0.93
PPP4R3AQ6IN85 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PPP4R3AQ6IN85 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
PPP4R3AQ6IN85 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC20.88■□□□□ 0.93
PPP4R3AQ6IN85 PVRIG2P-201ENST00000435460 978 ntBASIC20.88■□□□□ 0.93
PPP4R3AQ6IN85 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC20.88■□□□□ 0.93
PPP4R3AQ6IN85 AC092647.4-201ENST00000457211 535 ntBASIC20.88■□□□□ 0.93
PPP4R3AQ6IN85 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC20.88■□□□□ 0.93
PPP4R3AQ6IN85 REEP1-209ENST00000541910 969 ntTSL 2 BASIC20.88■□□□□ 0.93
PPP4R3AQ6IN85 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC20.88■□□□□ 0.93
PPP4R3AQ6IN85 NME3-204ENST00000563498 920 ntTSL 2 BASIC20.88■□□□□ 0.93
PPP4R3AQ6IN85 AL049597.2-201ENST00000565575 961 ntBASIC20.88■□□□□ 0.93
PPP4R3AQ6IN85 LINC01238-205ENST00000567549 1107 ntBASIC20.88■□□□□ 0.93
PPP4R3AQ6IN85 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC20.88■□□□□ 0.93
PPP4R3AQ6IN85 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
PPP4R3AQ6IN85 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
PPP4R3AQ6IN85 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC20.88■□□□□ 0.93
PPP4R3AQ6IN85 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC20.88■□□□□ 0.93
PPP4R3AQ6IN85 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC20.88■□□□□ 0.93
PPP4R3AQ6IN85 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PPP4R3AQ6IN85 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PPP4R3AQ6IN85 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
PPP4R3AQ6IN85 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC20.87■□□□□ 0.93
PPP4R3AQ6IN85 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PPP4R3AQ6IN85 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
PPP4R3AQ6IN85 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC20.87■□□□□ 0.93
PPP4R3AQ6IN85 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
PPP4R3AQ6IN85 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PPP4R3AQ6IN85 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PPP4R3AQ6IN85 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PPP4R3AQ6IN85 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms