Protein–RNA interactions for Protein: Q52LC2

ATP6AP1L, V-type proton ATPase subunit S1-like protein, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6AP1LQ52LC2 AC138028.4-201ENST00000564984 1845 ntBASIC17.83■□□□□ 0.44
ATP6AP1LQ52LC2 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ATP6AP1LQ52LC2 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ATP6AP1LQ52LC2 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
ATP6AP1LQ52LC2 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
ATP6AP1LQ52LC2 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ATP6AP1LQ52LC2 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
ATP6AP1LQ52LC2 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
ATP6AP1LQ52LC2 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
ATP6AP1LQ52LC2 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.82■□□□□ 0.44
ATP6AP1LQ52LC2 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATP6AP1LQ52LC2 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.82■□□□□ 0.44
ATP6AP1LQ52LC2 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.82■□□□□ 0.44
ATP6AP1LQ52LC2 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.82■□□□□ 0.44
ATP6AP1LQ52LC2 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATP6AP1LQ52LC2 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATP6AP1LQ52LC2 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.82■□□□□ 0.44
ATP6AP1LQ52LC2 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATP6AP1LQ52LC2 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ATP6AP1LQ52LC2 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC17.82■□□□□ 0.44
ATP6AP1LQ52LC2 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.82■□□□□ 0.44
ATP6AP1LQ52LC2 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.82■□□□□ 0.44
ATP6AP1LQ52LC2 DENND3-207ENST00000518347 850 ntTSL 2 BASIC17.82■□□□□ 0.44
ATP6AP1LQ52LC2 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
ATP6AP1LQ52LC2 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC17.82■□□□□ 0.44
ATP6AP1LQ52LC2 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.82■□□□□ 0.44
ATP6AP1LQ52LC2 IRX5-204ENST00000560154 879 ntTSL 5 BASIC17.82■□□□□ 0.44
ATP6AP1LQ52LC2 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATP6AP1LQ52LC2 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ATP6AP1LQ52LC2 FAM197Y4-202ENST00000622692 608 ntBASIC17.82■□□□□ 0.44
ATP6AP1LQ52LC2 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.82■□□□□ 0.44
ATP6AP1LQ52LC2 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.82■□□□□ 0.44
ATP6AP1LQ52LC2 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ATP6AP1LQ52LC2 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.82■□□□□ 0.44
ATP6AP1LQ52LC2 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.82■□□□□ 0.44
ATP6AP1LQ52LC2 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
ATP6AP1LQ52LC2 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ATP6AP1LQ52LC2 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.82■□□□□ 0.44
ATP6AP1LQ52LC2 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
ATP6AP1LQ52LC2 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.82■□□□□ 0.44
ATP6AP1LQ52LC2 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
ATP6AP1LQ52LC2 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
ATP6AP1LQ52LC2 REXO1L9P-201ENST00000604264 2108 ntBASIC17.81■□□□□ 0.44
ATP6AP1LQ52LC2 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ATP6AP1LQ52LC2 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ATP6AP1LQ52LC2 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATP6AP1LQ52LC2 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATP6AP1LQ52LC2 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ATP6AP1LQ52LC2 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ATP6AP1LQ52LC2 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATP6AP1LQ52LC2 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.81■□□□□ 0.44
ATP6AP1LQ52LC2 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
ATP6AP1LQ52LC2 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ATP6AP1LQ52LC2 MCCD1P1-208ENST00000445732 328 ntBASIC17.81■□□□□ 0.44
ATP6AP1LQ52LC2 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.81■□□□□ 0.44
ATP6AP1LQ52LC2 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
ATP6AP1LQ52LC2 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC17.81■□□□□ 0.44
ATP6AP1LQ52LC2 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
ATP6AP1LQ52LC2 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.81■□□□□ 0.44
ATP6AP1LQ52LC2 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
ATP6AP1LQ52LC2 AC008622.2-201ENST00000617006 1229 ntBASIC17.81■□□□□ 0.44
ATP6AP1LQ52LC2 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATP6AP1LQ52LC2 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.81■□□□□ 0.44
ATP6AP1LQ52LC2 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATP6AP1LQ52LC2 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ATP6AP1LQ52LC2 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATP6AP1LQ52LC2 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.81■□□□□ 0.44
ATP6AP1LQ52LC2 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.81■□□□□ 0.44
ATP6AP1LQ52LC2 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ATP6AP1LQ52LC2 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATP6AP1LQ52LC2 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATP6AP1LQ52LC2 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
ATP6AP1LQ52LC2 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
ATP6AP1LQ52LC2 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ATP6AP1LQ52LC2 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.8■□□□□ 0.44
ATP6AP1LQ52LC2 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.8■□□□□ 0.44
ATP6AP1LQ52LC2 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.8■□□□□ 0.44
ATP6AP1LQ52LC2 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
ATP6AP1LQ52LC2 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ATP6AP1LQ52LC2 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.8■□□□□ 0.44
ATP6AP1LQ52LC2 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.8■□□□□ 0.44
ATP6AP1LQ52LC2 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.8■□□□□ 0.44
ATP6AP1LQ52LC2 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ATP6AP1LQ52LC2 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
ATP6AP1LQ52LC2 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ATP6AP1LQ52LC2 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ATP6AP1LQ52LC2 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ATP6AP1LQ52LC2 MIR564-202ENST00000385049 94 ntBASIC17.8■□□□□ 0.44
ATP6AP1LQ52LC2 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
ATP6AP1LQ52LC2 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
ATP6AP1LQ52LC2 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC17.8■□□□□ 0.44
ATP6AP1LQ52LC2 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.8■□□□□ 0.44
ATP6AP1LQ52LC2 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ATP6AP1LQ52LC2 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.8■□□□□ 0.44
ATP6AP1LQ52LC2 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ATP6AP1LQ52LC2 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ATP6AP1LQ52LC2 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.8■□□□□ 0.44
ATP6AP1LQ52LC2 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.8■□□□□ 0.44
ATP6AP1LQ52LC2 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ATP6AP1LQ52LC2 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms