Protein–RNA interactions for Protein: Q4G0I0

CCSMST1, Protein CCSMST1, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSMST1Q4G0I0 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.89■□□□□ 0.45
CCSMST1Q4G0I0 AC079602.3-201ENST00000623931 403 ntBASIC17.89■□□□□ 0.45
CCSMST1Q4G0I0 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCSMST1Q4G0I0 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CCSMST1Q4G0I0 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCSMST1Q4G0I0 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCSMST1Q4G0I0 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCSMST1Q4G0I0 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CCSMST1Q4G0I0 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCSMST1Q4G0I0 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCSMST1Q4G0I0 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCSMST1Q4G0I0 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCSMST1Q4G0I0 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCSMST1Q4G0I0 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CCSMST1Q4G0I0 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCSMST1Q4G0I0 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCSMST1Q4G0I0 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CCSMST1Q4G0I0 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCSMST1Q4G0I0 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCSMST1Q4G0I0 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.88■□□□□ 0.45
CCSMST1Q4G0I0 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CCSMST1Q4G0I0 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CCSMST1Q4G0I0 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCSMST1Q4G0I0 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.88■□□□□ 0.45
CCSMST1Q4G0I0 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CCSMST1Q4G0I0 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CCSMST1Q4G0I0 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC17.88■□□□□ 0.45
CCSMST1Q4G0I0 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.88■□□□□ 0.45
CCSMST1Q4G0I0 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CCSMST1Q4G0I0 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.88■□□□□ 0.45
CCSMST1Q4G0I0 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.88■□□□□ 0.45
CCSMST1Q4G0I0 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.88■□□□□ 0.45
CCSMST1Q4G0I0 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
CCSMST1Q4G0I0 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.88■□□□□ 0.45
CCSMST1Q4G0I0 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CCSMST1Q4G0I0 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCSMST1Q4G0I0 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCSMST1Q4G0I0 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CCSMST1Q4G0I0 AC135776.1-201ENST00000319817 2481 ntBASIC17.88■□□□□ 0.45
CCSMST1Q4G0I0 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
CCSMST1Q4G0I0 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCSMST1Q4G0I0 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CCSMST1Q4G0I0 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCSMST1Q4G0I0 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
CCSMST1Q4G0I0 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCSMST1Q4G0I0 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCSMST1Q4G0I0 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCSMST1Q4G0I0 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCSMST1Q4G0I0 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCSMST1Q4G0I0 AC092597.1-201ENST00000487352 616 ntBASIC17.87■□□□□ 0.45
CCSMST1Q4G0I0 AC063952.2-201ENST00000498792 1227 ntBASIC17.87■□□□□ 0.45
CCSMST1Q4G0I0 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.87■□□□□ 0.45
CCSMST1Q4G0I0 MIR3180-4-201ENST00000582223 153 ntBASIC17.87■□□□□ 0.45
CCSMST1Q4G0I0 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.87■□□□□ 0.45
CCSMST1Q4G0I0 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CCSMST1Q4G0I0 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCSMST1Q4G0I0 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCSMST1Q4G0I0 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.87■□□□□ 0.45
CCSMST1Q4G0I0 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CCSMST1Q4G0I0 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCSMST1Q4G0I0 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCSMST1Q4G0I0 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CCSMST1Q4G0I0 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCSMST1Q4G0I0 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCSMST1Q4G0I0 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
CCSMST1Q4G0I0 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCSMST1Q4G0I0 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCSMST1Q4G0I0 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCSMST1Q4G0I0 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCSMST1Q4G0I0 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCSMST1Q4G0I0 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCSMST1Q4G0I0 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCSMST1Q4G0I0 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.86■□□□□ 0.45
CCSMST1Q4G0I0 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCSMST1Q4G0I0 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCSMST1Q4G0I0 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.86■□□□□ 0.45
CCSMST1Q4G0I0 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.86■□□□□ 0.45
CCSMST1Q4G0I0 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCSMST1Q4G0I0 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCSMST1Q4G0I0 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCSMST1Q4G0I0 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCSMST1Q4G0I0 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCSMST1Q4G0I0 AC022616.7-201ENST00000525383 220 ntBASIC17.86■□□□□ 0.45
CCSMST1Q4G0I0 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCSMST1Q4G0I0 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.86■□□□□ 0.45
CCSMST1Q4G0I0 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCSMST1Q4G0I0 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCSMST1Q4G0I0 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCSMST1Q4G0I0 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCSMST1Q4G0I0 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CCSMST1Q4G0I0 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCSMST1Q4G0I0 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCSMST1Q4G0I0 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.86■□□□□ 0.45
CCSMST1Q4G0I0 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCSMST1Q4G0I0 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCSMST1Q4G0I0 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.86■□□□□ 0.45
CCSMST1Q4G0I0 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCSMST1Q4G0I0 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCSMST1Q4G0I0 LINC01126-201ENST00000623515 1646 ntBASIC17.86■□□□□ 0.45
CCSMST1Q4G0I0 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms