Protein–RNA interactions for Protein: P61077

UBE2D3, Ubiquitin-conjugating enzyme E2 D3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3P61077 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC13.13□□□□□ -0.31
UBE2D3P61077 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
UBE2D3P61077 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
UBE2D3P61077 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
UBE2D3P61077 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
UBE2D3P61077 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
UBE2D3P61077 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC13.13□□□□□ -0.31
UBE2D3P61077 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC13.13□□□□□ -0.31
UBE2D3P61077 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
UBE2D3P61077 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
UBE2D3P61077 AC046158.3-201ENST00000624947 2558 ntBASIC13.13□□□□□ -0.31
UBE2D3P61077 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
UBE2D3P61077 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
UBE2D3P61077 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
UBE2D3P61077 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
UBE2D3P61077 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC13.12□□□□□ -0.31
UBE2D3P61077 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC13.12□□□□□ -0.31
UBE2D3P61077 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC13.12□□□□□ -0.31
UBE2D3P61077 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC13.12□□□□□ -0.31
UBE2D3P61077 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC13.12□□□□□ -0.31
UBE2D3P61077 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC13.12□□□□□ -0.31
UBE2D3P61077 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC13.12□□□□□ -0.31
UBE2D3P61077 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
UBE2D3P61077 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
UBE2D3P61077 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
UBE2D3P61077 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
UBE2D3P61077 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
UBE2D3P61077 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
UBE2D3P61077 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
UBE2D3P61077 AL357033.4-201ENST00000617703 1807 ntBASIC13.12□□□□□ -0.31
UBE2D3P61077 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
UBE2D3P61077 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
UBE2D3P61077 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC13.12□□□□□ -0.31
UBE2D3P61077 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC13.12□□□□□ -0.31
UBE2D3P61077 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
UBE2D3P61077 IRX5-204ENST00000560154 879 ntTSL 5 BASIC13.12□□□□□ -0.31
UBE2D3P61077 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC13.12□□□□□ -0.31
UBE2D3P61077 AC130371.2-201ENST00000619443 611 ntBASIC13.12□□□□□ -0.31
UBE2D3P61077 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
UBE2D3P61077 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC13.12□□□□□ -0.31
UBE2D3P61077 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
UBE2D3P61077 AL499627.1-201ENST00000569373 2188 ntBASIC13.12□□□□□ -0.31
UBE2D3P61077 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
UBE2D3P61077 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
UBE2D3P61077 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
UBE2D3P61077 RCC2P3-201ENST00000418112 1537 ntBASIC13.12□□□□□ -0.31
UBE2D3P61077 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC13.12□□□□□ -0.31
UBE2D3P61077 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC13.12□□□□□ -0.31
UBE2D3P61077 KRT8P45-201ENST00000414328 1447 ntBASIC13.12□□□□□ -0.31
UBE2D3P61077 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
UBE2D3P61077 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
UBE2D3P61077 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
UBE2D3P61077 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC13.12□□□□□ -0.31
UBE2D3P61077 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC13.12□□□□□ -0.31
UBE2D3P61077 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
UBE2D3P61077 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
UBE2D3P61077 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
UBE2D3P61077 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC13.11□□□□□ -0.31
UBE2D3P61077 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
UBE2D3P61077 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
UBE2D3P61077 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
UBE2D3P61077 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
UBE2D3P61077 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
UBE2D3P61077 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC13.11□□□□□ -0.31
UBE2D3P61077 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
UBE2D3P61077 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
UBE2D3P61077 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
UBE2D3P61077 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
UBE2D3P61077 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
UBE2D3P61077 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
UBE2D3P61077 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
UBE2D3P61077 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
UBE2D3P61077 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
UBE2D3P61077 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
UBE2D3P61077 HTR7P1-202ENST00000624664 4411 ntBASIC13.11□□□□□ -0.31
UBE2D3P61077 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
UBE2D3P61077 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
UBE2D3P61077 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
UBE2D3P61077 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC13.11□□□□□ -0.31
UBE2D3P61077 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
UBE2D3P61077 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC13.11□□□□□ -0.31
UBE2D3P61077 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC13.11□□□□□ -0.31
UBE2D3P61077 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC13.11□□□□□ -0.31
UBE2D3P61077 MIR4651-201ENST00000582622 73 ntBASIC13.11□□□□□ -0.31
UBE2D3P61077 RPS15-203ENST00000586096 570 ntTSL 2 BASIC13.11□□□□□ -0.31
UBE2D3P61077 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
UBE2D3P61077 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC13.11□□□□□ -0.31
UBE2D3P61077 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
UBE2D3P61077 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
UBE2D3P61077 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
UBE2D3P61077 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
UBE2D3P61077 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
UBE2D3P61077 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
UBE2D3P61077 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
UBE2D3P61077 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
UBE2D3P61077 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
UBE2D3P61077 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
UBE2D3P61077 CD276-203ENST00000537340 2439 ntTSL 2 BASIC13.11□□□□□ -0.31
UBE2D3P61077 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
UBE2D3P61077 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms