Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
AP3S2P59780 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC15.83■□□□□ 0.12
AP3S2P59780 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
AP3S2P59780 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
AP3S2P59780 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC15.83■□□□□ 0.12
AP3S2P59780 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
AP3S2P59780 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
AP3S2P59780 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
AP3S2P59780 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.83■□□□□ 0.12
AP3S2P59780 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
AP3S2P59780 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC15.83■□□□□ 0.12
AP3S2P59780 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC15.83■□□□□ 0.12
AP3S2P59780 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC15.82■□□□□ 0.12
AP3S2P59780 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP3S2P59780 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
AP3S2P59780 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP3S2P59780 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
AP3S2P59780 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC15.82■□□□□ 0.12
AP3S2P59780 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC15.82■□□□□ 0.12
AP3S2P59780 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC15.82■□□□□ 0.12
AP3S2P59780 TSPY23P-201ENST00000440136 739 ntBASIC15.82■□□□□ 0.12
AP3S2P59780 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
AP3S2P59780 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC15.82■□□□□ 0.12
AP3S2P59780 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
AP3S2P59780 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP3S2P59780 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP3S2P59780 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC15.82■□□□□ 0.12
AP3S2P59780 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP3S2P59780 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC15.82■□□□□ 0.12
AP3S2P59780 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP3S2P59780 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP3S2P59780 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP3S2P59780 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP3S2P59780 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP3S2P59780 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP3S2P59780 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
AP3S2P59780 HARS-201ENST00000307633 1780 ntTSL 2 BASIC15.82■□□□□ 0.12
AP3S2P59780 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC15.82■□□□□ 0.12
AP3S2P59780 AC124283.5-201ENST00000624661 1809 ntBASIC15.82■□□□□ 0.12
AP3S2P59780 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP3S2P59780 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP3S2P59780 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
AP3S2P59780 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC15.82■□□□□ 0.12
AP3S2P59780 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
AP3S2P59780 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP3S2P59780 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC15.82■□□□□ 0.12
AP3S2P59780 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP3S2P59780 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP3S2P59780 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
AP3S2P59780 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
AP3S2P59780 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
AP3S2P59780 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
AP3S2P59780 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
AP3S2P59780 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
AP3S2P59780 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
AP3S2P59780 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
AP3S2P59780 HLA-DQB1-201ENST00000374943 1656 ntBASIC15.81■□□□□ 0.12
AP3S2P59780 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
AP3S2P59780 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
AP3S2P59780 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
AP3S2P59780 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
AP3S2P59780 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
AP3S2P59780 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
AP3S2P59780 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
AP3S2P59780 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
AP3S2P59780 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC15.81■□□□□ 0.12
AP3S2P59780 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
AP3S2P59780 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC15.81■□□□□ 0.12
AP3S2P59780 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
AP3S2P59780 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
AP3S2P59780 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
AP3S2P59780 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC15.81■□□□□ 0.12
AP3S2P59780 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
AP3S2P59780 NKILA-202ENST00000614771 2598 ntBASIC15.81■□□□□ 0.12
AP3S2P59780 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC15.8■□□□□ 0.12
AP3S2P59780 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
AP3S2P59780 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
AP3S2P59780 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC15.8■□□□□ 0.12
AP3S2P59780 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
AP3S2P59780 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC15.8■□□□□ 0.12
AP3S2P59780 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
AP3S2P59780 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
AP3S2P59780 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC15.8■□□□□ 0.12
AP3S2P59780 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.8■□□□□ 0.12
AP3S2P59780 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
AP3S2P59780 AC010980.2-201ENST00000587099 1412 ntBASIC15.8■□□□□ 0.12
AP3S2P59780 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
AP3S2P59780 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
AP3S2P59780 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC15.8■□□□□ 0.12
AP3S2P59780 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
AP3S2P59780 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
AP3S2P59780 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
AP3S2P59780 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC15.8■□□□□ 0.12
AP3S2P59780 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC15.8■□□□□ 0.12
AP3S2P59780 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC15.8■□□□□ 0.12
AP3S2P59780 AC005829.2-201ENST00000571422 1056 ntBASIC15.8■□□□□ 0.12
AP3S2P59780 BID-214ENST00000617586 542 ntTSL 5 BASIC15.8■□□□□ 0.12
AP3S2P59780 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
AP3S2P59780 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
AP3S2P59780 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms