Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHMP4BP1P59074 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHMP4BP1P59074 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHMP4BP1P59074 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC21.01■□□□□ 0.95
CHMP4BP1P59074 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHMP4BP1P59074 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CHMP4BP1P59074 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CHMP4BP1P59074 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC21.01■□□□□ 0.95
CHMP4BP1P59074 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC21.01■□□□□ 0.95
CHMP4BP1P59074 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC21.01■□□□□ 0.95
CHMP4BP1P59074 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHMP4BP1P59074 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHMP4BP1P59074 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHMP4BP1P59074 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHMP4BP1P59074 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CHMP4BP1P59074 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHMP4BP1P59074 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
CHMP4BP1P59074 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHMP4BP1P59074 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHMP4BP1P59074 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHMP4BP1P59074 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHMP4BP1P59074 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHMP4BP1P59074 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHMP4BP1P59074 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHMP4BP1P59074 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
CHMP4BP1P59074 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHMP4BP1P59074 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC21.01■□□□□ 0.95
CHMP4BP1P59074 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CHMP4BP1P59074 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CHMP4BP1P59074 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CHMP4BP1P59074 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
CHMP4BP1P59074 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CHMP4BP1P59074 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC21■□□□□ 0.95
CHMP4BP1P59074 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CHMP4BP1P59074 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC21■□□□□ 0.95
CHMP4BP1P59074 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CHMP4BP1P59074 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CHMP4BP1P59074 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CHMP4BP1P59074 AC026396.1-201ENST00000419388 421 ntBASIC21■□□□□ 0.95
CHMP4BP1P59074 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC21■□□□□ 0.95
CHMP4BP1P59074 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC21■□□□□ 0.95
CHMP4BP1P59074 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC21■□□□□ 0.95
CHMP4BP1P59074 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC21■□□□□ 0.95
CHMP4BP1P59074 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
CHMP4BP1P59074 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
CHMP4BP1P59074 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CHMP4BP1P59074 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CHMP4BP1P59074 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CHMP4BP1P59074 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CHMP4BP1P59074 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC21■□□□□ 0.95
CHMP4BP1P59074 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC21■□□□□ 0.95
CHMP4BP1P59074 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CHMP4BP1P59074 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CHMP4BP1P59074 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CHMP4BP1P59074 CROCCP3-202ENST00000420820 1947 ntBASIC21■□□□□ 0.95
CHMP4BP1P59074 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
CHMP4BP1P59074 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CHMP4BP1P59074 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CHMP4BP1P59074 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CHMP4BP1P59074 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
CHMP4BP1P59074 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC20.99■□□□□ 0.95
CHMP4BP1P59074 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
CHMP4BP1P59074 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CHMP4BP1P59074 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC20.99■□□□□ 0.95
CHMP4BP1P59074 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC20.99■□□□□ 0.95
CHMP4BP1P59074 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC20.99■□□□□ 0.95
CHMP4BP1P59074 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC20.99■□□□□ 0.95
CHMP4BP1P59074 MIR3180-5-201ENST00000583743 153 ntBASIC20.99■□□□□ 0.95
CHMP4BP1P59074 IRF5-214ENST00000613821 595 ntTSL 5 BASIC20.99■□□□□ 0.95
CHMP4BP1P59074 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CHMP4BP1P59074 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CHMP4BP1P59074 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CHMP4BP1P59074 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CHMP4BP1P59074 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CHMP4BP1P59074 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.99■□□□□ 0.95
CHMP4BP1P59074 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CHMP4BP1P59074 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
CHMP4BP1P59074 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
CHMP4BP1P59074 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
CHMP4BP1P59074 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.98■□□□□ 0.95
CHMP4BP1P59074 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHMP4BP1P59074 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC20.98■□□□□ 0.95
CHMP4BP1P59074 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHMP4BP1P59074 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHMP4BP1P59074 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC20.98■□□□□ 0.95
CHMP4BP1P59074 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
CHMP4BP1P59074 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CHMP4BP1P59074 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHMP4BP1P59074 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHMP4BP1P59074 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHMP4BP1P59074 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHMP4BP1P59074 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CHMP4BP1P59074 GRAMD4P1-201ENST00000435181 1110 ntBASIC20.98■□□□□ 0.95
CHMP4BP1P59074 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC20.98■□□□□ 0.95
CHMP4BP1P59074 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC20.98■□□□□ 0.95
CHMP4BP1P59074 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CHMP4BP1P59074 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
CHMP4BP1P59074 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC20.98■□□□□ 0.95
CHMP4BP1P59074 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CHMP4BP1P59074 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms