Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLK1P49759 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.31■□□□□ 0.36
CLK1P49759 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.31■□□□□ 0.36
CLK1P49759 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.31■□□□□ 0.36
CLK1P49759 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLK1P49759 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.31■□□□□ 0.36
CLK1P49759 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.31■□□□□ 0.36
CLK1P49759 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLK1P49759 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLK1P49759 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CLK1P49759 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.31■□□□□ 0.36
CLK1P49759 Z85996.1-201ENST00000494644 937 ntBASIC17.31■□□□□ 0.36
CLK1P49759 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.31■□□□□ 0.36
CLK1P49759 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.31■□□□□ 0.36
CLK1P49759 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLK1P49759 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.31■□□□□ 0.36
CLK1P49759 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC17.31■□□□□ 0.36
CLK1P49759 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.31■□□□□ 0.36
CLK1P49759 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLK1P49759 SDHAP1-207ENST00000440850 2000 ntBASIC17.31■□□□□ 0.36
CLK1P49759 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CLK1P49759 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.31■□□□□ 0.36
CLK1P49759 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLK1P49759 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLK1P49759 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CLK1P49759 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.31■□□□□ 0.36
CLK1P49759 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLK1P49759 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CLK1P49759 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLK1P49759 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.3■□□□□ 0.36
CLK1P49759 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CLK1P49759 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CLK1P49759 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLK1P49759 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CLK1P49759 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
CLK1P49759 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CLK1P49759 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLK1P49759 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLK1P49759 AC008550.1-201ENST00000511500 884 ntBASIC17.3■□□□□ 0.36
CLK1P49759 CD177P1-201ENST00000606252 935 ntBASIC17.3■□□□□ 0.36
CLK1P49759 AL049637.2-201ENST00000641778 930 ntBASIC17.3■□□□□ 0.36
CLK1P49759 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.3■□□□□ 0.36
CLK1P49759 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLK1P49759 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.3■□□□□ 0.36
CLK1P49759 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLK1P49759 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.3■□□□□ 0.36
CLK1P49759 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CLK1P49759 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLK1P49759 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLK1P49759 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CLK1P49759 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLK1P49759 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLK1P49759 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLK1P49759 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.29■□□□□ 0.36
CLK1P49759 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.29■□□□□ 0.36
CLK1P49759 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLK1P49759 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLK1P49759 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLK1P49759 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.29■□□□□ 0.36
CLK1P49759 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.29■□□□□ 0.36
CLK1P49759 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CLK1P49759 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.29■□□□□ 0.36
CLK1P49759 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLK1P49759 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLK1P49759 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLK1P49759 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.29■□□□□ 0.36
CLK1P49759 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.29■□□□□ 0.36
CLK1P49759 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC17.29■□□□□ 0.36
CLK1P49759 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CLK1P49759 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLK1P49759 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.29■□□□□ 0.36
CLK1P49759 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.29■□□□□ 0.36
CLK1P49759 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.29■□□□□ 0.36
CLK1P49759 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CLK1P49759 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLK1P49759 FSCN1P1-201ENST00000568912 1481 ntBASIC17.29■□□□□ 0.36
CLK1P49759 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.29■□□□□ 0.36
CLK1P49759 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLK1P49759 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLK1P49759 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CLK1P49759 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLK1P49759 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLK1P49759 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
CLK1P49759 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CLK1P49759 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLK1P49759 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.28■□□□□ 0.36
CLK1P49759 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLK1P49759 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLK1P49759 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLK1P49759 KRT8P41-201ENST00000533985 1514 ntBASIC17.28■□□□□ 0.36
CLK1P49759 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CLK1P49759 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLK1P49759 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CLK1P49759 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.28■□□□□ 0.36
CLK1P49759 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.28■□□□□ 0.36
CLK1P49759 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLK1P49759 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLK1P49759 AC004951.3-201ENST00000418645 1148 ntBASIC17.28■□□□□ 0.36
CLK1P49759 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17.28■□□□□ 0.36
CLK1P49759 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms