Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC14.56□□□□□ -0.08
CDC34P49427 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CDC34P49427 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC14.56□□□□□ -0.08
CDC34P49427 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC14.56□□□□□ -0.08
CDC34P49427 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC14.56□□□□□ -0.08
CDC34P49427 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
CDC34P49427 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC14.56□□□□□ -0.08
CDC34P49427 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
CDC34P49427 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDC34P49427 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDC34P49427 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
CDC34P49427 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC14.56□□□□□ -0.08
CDC34P49427 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC14.56□□□□□ -0.08
CDC34P49427 AC080080.1-201ENST00000625121 2420 ntBASIC14.56□□□□□ -0.08
CDC34P49427 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC14.56□□□□□ -0.08
CDC34P49427 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CDC34P49427 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
CDC34P49427 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDC34P49427 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
CDC34P49427 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
CDC34P49427 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDC34P49427 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDC34P49427 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC14.55□□□□□ -0.08
CDC34P49427 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
CDC34P49427 NARF-204ENST00000390006 1766 ntTSL 2 BASIC14.55□□□□□ -0.08
CDC34P49427 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC14.55□□□□□ -0.08
CDC34P49427 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDC34P49427 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CDC34P49427 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDC34P49427 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC14.55□□□□□ -0.08
CDC34P49427 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC14.55□□□□□ -0.08
CDC34P49427 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CDC34P49427 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC14.55□□□□□ -0.08
CDC34P49427 HACD1-201ENST00000326961 773 ntTSL 2 BASIC14.55□□□□□ -0.08
CDC34P49427 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDC34P49427 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CDC34P49427 AC034268.1-201ENST00000441047 882 ntBASIC14.55□□□□□ -0.08
CDC34P49427 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC14.55□□□□□ -0.08
CDC34P49427 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CDC34P49427 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC14.55□□□□□ -0.08
CDC34P49427 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC14.55□□□□□ -0.08
CDC34P49427 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CDC34P49427 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDC34P49427 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC14.55□□□□□ -0.08
CDC34P49427 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC14.55□□□□□ -0.08
CDC34P49427 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDC34P49427 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC14.55□□□□□ -0.08
CDC34P49427 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
CDC34P49427 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC14.55□□□□□ -0.08
CDC34P49427 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDC34P49427 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
CDC34P49427 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDC34P49427 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDC34P49427 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CDC34P49427 AC108860.2-201ENST00000562760 2183 ntBASIC14.54□□□□□ -0.08
CDC34P49427 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
CDC34P49427 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDC34P49427 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDC34P49427 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDC34P49427 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDC34P49427 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
CDC34P49427 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC14.54□□□□□ -0.08
CDC34P49427 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC14.54□□□□□ -0.08
CDC34P49427 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
CDC34P49427 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDC34P49427 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDC34P49427 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC14.54□□□□□ -0.08
CDC34P49427 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC14.54□□□□□ -0.08
CDC34P49427 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
CDC34P49427 AL160286.2-201ENST00000567150 934 ntBASIC14.54□□□□□ -0.08
CDC34P49427 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC14.54□□□□□ -0.08
CDC34P49427 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC14.54□□□□□ -0.08
CDC34P49427 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDC34P49427 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
CDC34P49427 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
CDC34P49427 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CDC34P49427 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDC34P49427 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC14.54□□□□□ -0.08
CDC34P49427 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC14.54□□□□□ -0.08
CDC34P49427 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CDC34P49427 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDC34P49427 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CDC34P49427 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
CDC34P49427 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CDC34P49427 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDC34P49427 AC008556.1-201ENST00000610908 2040 ntBASIC14.54□□□□□ -0.08
CDC34P49427 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDC34P49427 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC14.54□□□□□ -0.08
CDC34P49427 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDC34P49427 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CDC34P49427 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CDC34P49427 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDC34P49427 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDC34P49427 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDC34P49427 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
CDC34P49427 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CDC34P49427 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CDC34P49427 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDC34P49427 AD000864.1-201ENST00000624076 2295 ntBASIC14.53□□□□□ -0.08
CDC34P49427 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms