Protein–RNA interactions for Protein: P11836

MS4A1, B-lymphocyte antigen CD20, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A1P11836 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC23.67■■□□□ 1.38
MS4A1P11836 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
MS4A1P11836 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
MS4A1P11836 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC23.67■■□□□ 1.38
MS4A1P11836 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC23.67■■□□□ 1.38
MS4A1P11836 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
MS4A1P11836 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
MS4A1P11836 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
MS4A1P11836 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
MS4A1P11836 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
MS4A1P11836 C2orf69P3-201ENST00000565542 1120 ntBASIC23.67■■□□□ 1.38
MS4A1P11836 AP000525.1-201ENST00000608286 694 ntBASIC23.67■■□□□ 1.38
MS4A1P11836 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC23.67■■□□□ 1.38
MS4A1P11836 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC23.67■■□□□ 1.38
MS4A1P11836 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC23.67■■□□□ 1.38
MS4A1P11836 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
MS4A1P11836 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
MS4A1P11836 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
MS4A1P11836 KRT8P7-201ENST00000533003 1432 ntBASIC23.67■■□□□ 1.38
MS4A1P11836 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC23.67■■□□□ 1.38
MS4A1P11836 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
MS4A1P11836 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
MS4A1P11836 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
MS4A1P11836 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
MS4A1P11836 PRR31-201ENST00000371629 978 ntTSL 2 BASIC23.66■■□□□ 1.38
MS4A1P11836 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
MS4A1P11836 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC23.66■■□□□ 1.38
MS4A1P11836 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC23.66■■□□□ 1.38
MS4A1P11836 SNORA78-201ENST00000459373 127 ntBASIC23.66■■□□□ 1.38
MS4A1P11836 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC23.66■■□□□ 1.38
MS4A1P11836 BX088651.1-201ENST00000540551 451 ntBASIC23.66■■□□□ 1.38
MS4A1P11836 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC23.66■■□□□ 1.38
MS4A1P11836 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
MS4A1P11836 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC23.66■■□□□ 1.38
MS4A1P11836 AC116562.4-202ENST00000641738 218 ntBASIC23.66■■□□□ 1.38
MS4A1P11836 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
MS4A1P11836 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
MS4A1P11836 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
MS4A1P11836 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
MS4A1P11836 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
MS4A1P11836 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC23.66■■□□□ 1.38
MS4A1P11836 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
MS4A1P11836 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
MS4A1P11836 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
MS4A1P11836 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
MS4A1P11836 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
MS4A1P11836 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
MS4A1P11836 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
MS4A1P11836 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
MS4A1P11836 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
MS4A1P11836 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC23.65■■□□□ 1.38
MS4A1P11836 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
MS4A1P11836 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC23.65■■□□□ 1.38
MS4A1P11836 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
MS4A1P11836 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
MS4A1P11836 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC23.65■■□□□ 1.38
MS4A1P11836 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC23.65■■□□□ 1.38
MS4A1P11836 HIST1H2APS4-201ENST00000362070 348 ntBASIC23.65■■□□□ 1.38
MS4A1P11836 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC23.65■■□□□ 1.38
MS4A1P11836 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC23.65■■□□□ 1.38
MS4A1P11836 AP003041.3-201ENST00000527151 707 ntBASIC23.65■■□□□ 1.38
MS4A1P11836 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
MS4A1P11836 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
MS4A1P11836 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
MS4A1P11836 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC23.65■■□□□ 1.38
MS4A1P11836 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
MS4A1P11836 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC23.65■■□□□ 1.38
MS4A1P11836 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
MS4A1P11836 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
MS4A1P11836 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC23.64■■□□□ 1.38
MS4A1P11836 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC23.64■■□□□ 1.38
MS4A1P11836 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
MS4A1P11836 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.38
MS4A1P11836 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
MS4A1P11836 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
MS4A1P11836 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC23.64■■□□□ 1.38
MS4A1P11836 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
MS4A1P11836 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC23.64■■□□□ 1.37
MS4A1P11836 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.37
MS4A1P11836 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
MS4A1P11836 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC23.64■■□□□ 1.37
MS4A1P11836 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC23.64■■□□□ 1.37
MS4A1P11836 WWOX-216ENST00000569818 525 ntBASIC23.64■■□□□ 1.37
MS4A1P11836 MIR4674-201ENST00000582457 87 ntBASIC23.64■■□□□ 1.37
MS4A1P11836 MIR4497-201ENST00000583208 89 ntBASIC23.64■■□□□ 1.37
MS4A1P11836 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
MS4A1P11836 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC23.64■■□□□ 1.37
MS4A1P11836 GLDC-219ENST00000640208 420 ntTSL 2 BASIC23.64■■□□□ 1.37
MS4A1P11836 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
MS4A1P11836 AC092338.2-201ENST00000568827 1415 ntBASIC23.64■■□□□ 1.37
MS4A1P11836 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC23.64■■□□□ 1.37
MS4A1P11836 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC23.64■■□□□ 1.37
MS4A1P11836 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
MS4A1P11836 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
MS4A1P11836 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC23.63■■□□□ 1.37
MS4A1P11836 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
MS4A1P11836 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC23.63■■□□□ 1.37
MS4A1P11836 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
MS4A1P11836 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
MS4A1P11836 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms