Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC24.17■■□□□ 1.46
COL5A2P05997 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
COL5A2P05997 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
COL5A2P05997 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
COL5A2P05997 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
COL5A2P05997 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
COL5A2P05997 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
COL5A2P05997 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
COL5A2P05997 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
COL5A2P05997 AC007967.2-201ENST00000432613 625 ntBASIC24.16■■□□□ 1.46
COL5A2P05997 AC112482.1-201ENST00000492080 688 ntBASIC24.16■■□□□ 1.46
COL5A2P05997 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC24.16■■□□□ 1.46
COL5A2P05997 UNC93B6-202ENST00000528242 690 ntBASIC24.16■■□□□ 1.46
COL5A2P05997 RPS29-206ENST00000557111 488 ntTSL 2 BASIC24.16■■□□□ 1.46
COL5A2P05997 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC24.16■■□□□ 1.46
COL5A2P05997 AC134684.3-201ENST00000641758 218 ntBASIC24.16■■□□□ 1.46
COL5A2P05997 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
COL5A2P05997 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
COL5A2P05997 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
COL5A2P05997 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC24.16■■□□□ 1.46
COL5A2P05997 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
COL5A2P05997 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC24.15■■□□□ 1.46
COL5A2P05997 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC24.15■■□□□ 1.46
COL5A2P05997 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
COL5A2P05997 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC24.15■■□□□ 1.46
COL5A2P05997 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC24.15■■□□□ 1.46
COL5A2P05997 PMP22-202ENST00000395936 816 ntTSL 3 BASIC24.15■■□□□ 1.46
COL5A2P05997 MTDHP4-201ENST00000600287 670 ntBASIC24.15■■□□□ 1.46
COL5A2P05997 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC24.15■■□□□ 1.46
COL5A2P05997 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
COL5A2P05997 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
COL5A2P05997 AC099343.3-201ENST00000605834 2503 ntBASIC24.15■■□□□ 1.46
COL5A2P05997 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC24.15■■□□□ 1.46
COL5A2P05997 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
COL5A2P05997 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
COL5A2P05997 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
COL5A2P05997 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC24.15■■□□□ 1.46
COL5A2P05997 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC24.15■■□□□ 1.46
COL5A2P05997 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC24.15■■□□□ 1.46
COL5A2P05997 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
COL5A2P05997 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC24.14■■□□□ 1.46
COL5A2P05997 LINC02084-201ENST00000606069 1096 ntBASIC24.14■■□□□ 1.46
COL5A2P05997 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC24.14■■□□□ 1.46
COL5A2P05997 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
COL5A2P05997 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC24.14■■□□□ 1.45
COL5A2P05997 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC24.14■■□□□ 1.45
COL5A2P05997 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC24.14■■□□□ 1.45
COL5A2P05997 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
COL5A2P05997 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
COL5A2P05997 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
COL5A2P05997 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC24.13■■□□□ 1.45
COL5A2P05997 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
COL5A2P05997 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.45
COL5A2P05997 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC24.13■■□□□ 1.45
COL5A2P05997 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC24.13■■□□□ 1.45
COL5A2P05997 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC24.13■■□□□ 1.45
COL5A2P05997 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC24.13■■□□□ 1.45
COL5A2P05997 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC24.13■■□□□ 1.45
COL5A2P05997 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC24.13■■□□□ 1.45
COL5A2P05997 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC24.13■■□□□ 1.45
COL5A2P05997 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
COL5A2P05997 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC24.13■■□□□ 1.45
COL5A2P05997 RNF151-202ENST00000569210 853 ntTSL 2 BASIC24.13■■□□□ 1.45
COL5A2P05997 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
COL5A2P05997 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC24.13■■□□□ 1.45
COL5A2P05997 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
COL5A2P05997 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC24.13■■□□□ 1.45
COL5A2P05997 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
COL5A2P05997 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC24.13■■□□□ 1.45
COL5A2P05997 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
COL5A2P05997 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC24.13■■□□□ 1.45
COL5A2P05997 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC24.13■■□□□ 1.45
COL5A2P05997 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC24.13■■□□□ 1.45
COL5A2P05997 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC24.13■■□□□ 1.45
COL5A2P05997 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
COL5A2P05997 CTNS-203ENST00000399306 803 ntTSL 3 BASIC24.13■■□□□ 1.45
COL5A2P05997 RPS8P6-201ENST00000426177 609 ntBASIC24.13■■□□□ 1.45
COL5A2P05997 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC24.13■■□□□ 1.45
COL5A2P05997 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
COL5A2P05997 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC24.13■■□□□ 1.45
COL5A2P05997 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC24.13■■□□□ 1.45
COL5A2P05997 RNA5SP416-201ENST00000516838 111 ntBASIC24.13■■□□□ 1.45
COL5A2P05997 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC24.13■■□□□ 1.45
COL5A2P05997 AC105339.3-201ENST00000560043 636 ntBASIC24.13■■□□□ 1.45
COL5A2P05997 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC24.13■■□□□ 1.45
COL5A2P05997 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
COL5A2P05997 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC24.12■■□□□ 1.45
COL5A2P05997 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC24.12■■□□□ 1.45
COL5A2P05997 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
COL5A2P05997 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
COL5A2P05997 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
COL5A2P05997 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
COL5A2P05997 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC24.12■■□□□ 1.45
COL5A2P05997 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
COL5A2P05997 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
COL5A2P05997 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
COL5A2P05997 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC24.12■■□□□ 1.45
COL5A2P05997 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
COL5A2P05997 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC24.12■■□□□ 1.45
COL5A2P05997 CRCP-205ENST00000431089 942 ntTSL 2 BASIC24.12■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms