Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC22.12■■□□□ 1.13
CHGBP05060 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
CHGBP05060 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CHGBP05060 MIR149-201ENST00000384879 89 ntBASIC22.12■■□□□ 1.13
CHGBP05060 AC116407.4-201ENST00000623319 1061 ntBASIC22.12■■□□□ 1.13
CHGBP05060 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CHGBP05060 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC22.12■■□□□ 1.13
CHGBP05060 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CHGBP05060 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC22.12■■□□□ 1.13
CHGBP05060 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC22.12■■□□□ 1.13
CHGBP05060 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CHGBP05060 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
CHGBP05060 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CHGBP05060 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CHGBP05060 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CHGBP05060 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CHGBP05060 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CHGBP05060 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC22.11■■□□□ 1.13
CHGBP05060 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC22.11■■□□□ 1.13
CHGBP05060 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CHGBP05060 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC22.11■■□□□ 1.13
CHGBP05060 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC22.11■■□□□ 1.13
CHGBP05060 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CHGBP05060 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CHGBP05060 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CHGBP05060 MIR662-201ENST00000384847 95 ntBASIC22.11■■□□□ 1.13
CHGBP05060 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC22.11■■□□□ 1.13
CHGBP05060 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC22.11■■□□□ 1.13
CHGBP05060 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC22.11■■□□□ 1.13
CHGBP05060 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC22.11■■□□□ 1.13
CHGBP05060 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC22.11■■□□□ 1.13
CHGBP05060 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CHGBP05060 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC22.11■■□□□ 1.13
CHGBP05060 MIR3180-4-201ENST00000582223 153 ntBASIC22.11■■□□□ 1.13
CHGBP05060 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CHGBP05060 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CHGBP05060 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
CHGBP05060 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CHGBP05060 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC22.11■■□□□ 1.13
CHGBP05060 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC22.11■■□□□ 1.13
CHGBP05060 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC22.11■■□□□ 1.13
CHGBP05060 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CHGBP05060 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CHGBP05060 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
CHGBP05060 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CHGBP05060 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CHGBP05060 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC22.1■■□□□ 1.13
CHGBP05060 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CHGBP05060 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CHGBP05060 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CHGBP05060 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CHGBP05060 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CHGBP05060 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC22.1■■□□□ 1.13
CHGBP05060 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CHGBP05060 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC22.1■■□□□ 1.13
CHGBP05060 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CHGBP05060 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
CHGBP05060 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC22.1■■□□□ 1.13
CHGBP05060 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CHGBP05060 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC22.1■■□□□ 1.13
CHGBP05060 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CHGBP05060 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CHGBP05060 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CHGBP05060 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CHGBP05060 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CHGBP05060 AC135776.1-201ENST00000319817 2481 ntBASIC22.09■■□□□ 1.13
CHGBP05060 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CHGBP05060 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
CHGBP05060 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CHGBP05060 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC22.09■■□□□ 1.13
CHGBP05060 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
CHGBP05060 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
CHGBP05060 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC22.09■■□□□ 1.13
CHGBP05060 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
CHGBP05060 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CHGBP05060 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
CHGBP05060 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC22.09■■□□□ 1.13
CHGBP05060 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CHGBP05060 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC22.09■■□□□ 1.13
CHGBP05060 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CHGBP05060 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
CHGBP05060 AL645929.1-201ENST00000420084 975 ntBASIC22.09■■□□□ 1.13
CHGBP05060 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CHGBP05060 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
CHGBP05060 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC22.09■■□□□ 1.13
CHGBP05060 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC22.09■■□□□ 1.13
CHGBP05060 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
CHGBP05060 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC22.09■■□□□ 1.13
CHGBP05060 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC22.09■■□□□ 1.13
CHGBP05060 LITAF-220ENST00000620789 692 ntTSL 5 BASIC22.09■■□□□ 1.13
CHGBP05060 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CHGBP05060 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CHGBP05060 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC22.09■■□□□ 1.13
CHGBP05060 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC22.09■■□□□ 1.13
CHGBP05060 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
CHGBP05060 RNF165-205ENST00000588679 2904 ntBASIC22.09■■□□□ 1.13
CHGBP05060 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
CHGBP05060 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CHGBP05060 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
CHGBP05060 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms