Protein–RNA interactions for Protein: P04180

LCAT, Phosphatidylcholine-sterol acyltransferase, humanhuman

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCATP04180 TSPY15P-201ENST00000457163 923 ntBASIC16.13■□□□□ 0.17
LCATP04180 BX088651.1-201ENST00000540551 451 ntBASIC16.13■□□□□ 0.17
LCATP04180 GLDC-219ENST00000640208 420 ntTSL 2 BASIC16.13■□□□□ 0.17
LCATP04180 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.13■□□□□ 0.17
LCATP04180 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LCATP04180 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LCATP04180 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LCATP04180 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.13■□□□□ 0.17
LCATP04180 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
LCATP04180 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.13■□□□□ 0.17
LCATP04180 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
LCATP04180 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.13■□□□□ 0.17
LCATP04180 AC036111.1-201ENST00000533973 1582 ntBASIC16.13■□□□□ 0.17
LCATP04180 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LCATP04180 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.13■□□□□ 0.17
LCATP04180 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LCATP04180 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LCATP04180 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LCATP04180 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LCATP04180 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LCATP04180 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LCATP04180 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.12■□□□□ 0.17
LCATP04180 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.12■□□□□ 0.17
LCATP04180 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
LCATP04180 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LCATP04180 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.12■□□□□ 0.17
LCATP04180 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
LCATP04180 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
LCATP04180 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LCATP04180 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LCATP04180 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC16.12■□□□□ 0.17
LCATP04180 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LCATP04180 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
LCATP04180 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LCATP04180 MIR4674-201ENST00000582457 87 ntBASIC16.12■□□□□ 0.17
LCATP04180 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC16.12■□□□□ 0.17
LCATP04180 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC16.12■□□□□ 0.17
LCATP04180 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC16.12■□□□□ 0.17
LCATP04180 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
LCATP04180 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LCATP04180 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LCATP04180 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LCATP04180 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LCATP04180 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
LCATP04180 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.12■□□□□ 0.17
LCATP04180 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
LCATP04180 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
LCATP04180 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LCATP04180 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
LCATP04180 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LCATP04180 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
LCATP04180 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LCATP04180 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LCATP04180 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LCATP04180 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LCATP04180 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LCATP04180 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LCATP04180 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LCATP04180 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LCATP04180 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
LCATP04180 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
LCATP04180 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LCATP04180 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
LCATP04180 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LCATP04180 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC16.11■□□□□ 0.17
LCATP04180 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
LCATP04180 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LCATP04180 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LCATP04180 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
LCATP04180 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC16.11■□□□□ 0.17
LCATP04180 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
LCATP04180 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
LCATP04180 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC16.11■□□□□ 0.17
LCATP04180 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC16.11■□□□□ 0.17
LCATP04180 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC16.11■□□□□ 0.17
LCATP04180 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
LCATP04180 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LCATP04180 KRT18P41-201ENST00000518924 1277 ntBASIC16.11■□□□□ 0.17
LCATP04180 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.11■□□□□ 0.17
LCATP04180 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LCATP04180 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.11■□□□□ 0.17
LCATP04180 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC16.11■□□□□ 0.17
LCATP04180 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.11■□□□□ 0.17
LCATP04180 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.11■□□□□ 0.17
LCATP04180 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LCATP04180 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
LCATP04180 AC135050.7-201ENST00000624508 2218 ntBASIC16.11■□□□□ 0.17
LCATP04180 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
LCATP04180 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LCATP04180 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LCATP04180 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LCATP04180 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
LCATP04180 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC16.11■□□□□ 0.17
LCATP04180 AC092338.2-201ENST00000568827 1415 ntBASIC16.11■□□□□ 0.17
LCATP04180 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LCATP04180 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
LCATP04180 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
LCATP04180 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
LCATP04180 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
LCATP04180 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms