Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ALDH1A1P00352 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ALDH1A1P00352 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
ALDH1A1P00352 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
ALDH1A1P00352 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ALDH1A1P00352 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.95■□□□□ 0.94
ALDH1A1P00352 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
ALDH1A1P00352 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
ALDH1A1P00352 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ALDH1A1P00352 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
ALDH1A1P00352 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
ALDH1A1P00352 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC20.94■□□□□ 0.94
ALDH1A1P00352 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
ALDH1A1P00352 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC20.94■□□□□ 0.94
ALDH1A1P00352 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC20.94■□□□□ 0.94
ALDH1A1P00352 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC20.94■□□□□ 0.94
ALDH1A1P00352 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ALDH1A1P00352 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ALDH1A1P00352 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
ALDH1A1P00352 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ALDH1A1P00352 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
ALDH1A1P00352 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC20.94■□□□□ 0.94
ALDH1A1P00352 CFL1-202ENST00000524553 860 ntTSL 2 BASIC20.94■□□□□ 0.94
ALDH1A1P00352 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC20.94■□□□□ 0.94
ALDH1A1P00352 COX5A-206ENST00000568783 571 ntTSL 3 BASIC20.94■□□□□ 0.94
ALDH1A1P00352 RNF151-202ENST00000569210 853 ntTSL 2 BASIC20.94■□□□□ 0.94
ALDH1A1P00352 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC20.94■□□□□ 0.94
ALDH1A1P00352 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC20.94■□□□□ 0.94
ALDH1A1P00352 MIR1199-201ENST00000621445 119 ntBASIC20.94■□□□□ 0.94
ALDH1A1P00352 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC20.94■□□□□ 0.94
ALDH1A1P00352 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ALDH1A1P00352 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ALDH1A1P00352 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ALDH1A1P00352 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ALDH1A1P00352 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
ALDH1A1P00352 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ALDH1A1P00352 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
ALDH1A1P00352 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ALDH1A1P00352 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ALDH1A1P00352 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
ALDH1A1P00352 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ALDH1A1P00352 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.93■□□□□ 0.94
ALDH1A1P00352 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.93■□□□□ 0.94
ALDH1A1P00352 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
ALDH1A1P00352 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.93■□□□□ 0.94
ALDH1A1P00352 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
ALDH1A1P00352 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
ALDH1A1P00352 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ALDH1A1P00352 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ALDH1A1P00352 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC20.93■□□□□ 0.94
ALDH1A1P00352 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC20.93■□□□□ 0.94
ALDH1A1P00352 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC20.93■□□□□ 0.94
ALDH1A1P00352 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC20.93■□□□□ 0.94
ALDH1A1P00352 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC20.93■□□□□ 0.94
ALDH1A1P00352 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC20.93■□□□□ 0.94
ALDH1A1P00352 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ALDH1A1P00352 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ALDH1A1P00352 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ALDH1A1P00352 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ALDH1A1P00352 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
ALDH1A1P00352 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC20.92■□□□□ 0.94
ALDH1A1P00352 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
ALDH1A1P00352 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC20.92■□□□□ 0.94
ALDH1A1P00352 FP475955.4-201ENST00000623131 1990 ntBASIC20.92■□□□□ 0.94
ALDH1A1P00352 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
ALDH1A1P00352 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ALDH1A1P00352 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ALDH1A1P00352 CD9-202ENST00000382515 1229 ntTSL 5 BASIC20.92■□□□□ 0.94
ALDH1A1P00352 PNMT-202ENST00000394246 821 ntTSL 2 BASIC20.92■□□□□ 0.94
ALDH1A1P00352 SLC4A1APP2-201ENST00000424054 1259 ntBASIC20.92■□□□□ 0.94
ALDH1A1P00352 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC20.92■□□□□ 0.94
ALDH1A1P00352 AC244107.1-201ENST00000442033 332 ntBASIC20.92■□□□□ 0.94
ALDH1A1P00352 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC20.92■□□□□ 0.94
ALDH1A1P00352 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
ALDH1A1P00352 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC20.92■□□□□ 0.94
ALDH1A1P00352 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC20.92■□□□□ 0.94
ALDH1A1P00352 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC20.92■□□□□ 0.94
ALDH1A1P00352 AC005593.1-201ENST00000624894 515 ntBASIC20.92■□□□□ 0.94
ALDH1A1P00352 ORC5-208ENST00000626700 344 ntTSL 3 BASIC20.92■□□□□ 0.94
ALDH1A1P00352 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ALDH1A1P00352 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ALDH1A1P00352 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
ALDH1A1P00352 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC20.92■□□□□ 0.94
ALDH1A1P00352 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC20.92■□□□□ 0.94
ALDH1A1P00352 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ALDH1A1P00352 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC20.92■□□□□ 0.94
ALDH1A1P00352 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ALDH1A1P00352 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.92■□□□□ 0.94
ALDH1A1P00352 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
ALDH1A1P00352 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
ALDH1A1P00352 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ALDH1A1P00352 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
ALDH1A1P00352 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ALDH1A1P00352 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ALDH1A1P00352 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC20.91■□□□□ 0.94
ALDH1A1P00352 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.91■□□□□ 0.94
ALDH1A1P00352 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC20.91■□□□□ 0.94
ALDH1A1P00352 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
ALDH1A1P00352 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ALDH1A1P00352 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 276.3 ms