Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRUB2O95900 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRUB2O95900 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.3■□□□□ 0.68
TRUB2O95900 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRUB2O95900 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TRUB2O95900 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.3■□□□□ 0.68
TRUB2O95900 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.3■□□□□ 0.68
TRUB2O95900 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.3■□□□□ 0.68
TRUB2O95900 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRUB2O95900 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC19.3■□□□□ 0.68
TRUB2O95900 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC19.3■□□□□ 0.68
TRUB2O95900 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TRUB2O95900 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TRUB2O95900 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TRUB2O95900 AC063952.2-201ENST00000498792 1227 ntBASIC19.3■□□□□ 0.68
TRUB2O95900 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.3■□□□□ 0.68
TRUB2O95900 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
TRUB2O95900 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC19.3■□□□□ 0.68
TRUB2O95900 LTBR-211ENST00000543190 785 ntTSL 3 BASIC19.3■□□□□ 0.68
TRUB2O95900 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC19.3■□□□□ 0.68
TRUB2O95900 AL049597.2-201ENST00000565575 961 ntBASIC19.3■□□□□ 0.68
TRUB2O95900 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
TRUB2O95900 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC19.3■□□□□ 0.68
TRUB2O95900 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TRUB2O95900 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
TRUB2O95900 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.3■□□□□ 0.68
TRUB2O95900 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRUB2O95900 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRUB2O95900 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRUB2O95900 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRUB2O95900 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC19.29■□□□□ 0.68
TRUB2O95900 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRUB2O95900 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.29■□□□□ 0.68
TRUB2O95900 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRUB2O95900 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.29■□□□□ 0.68
TRUB2O95900 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRUB2O95900 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
TRUB2O95900 AL162741.1-201ENST00000565563 1558 ntBASIC19.29■□□□□ 0.68
TRUB2O95900 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
TRUB2O95900 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
TRUB2O95900 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRUB2O95900 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TRUB2O95900 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
TRUB2O95900 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC19.29■□□□□ 0.68
TRUB2O95900 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC19.29■□□□□ 0.68
TRUB2O95900 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TRUB2O95900 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC19.29■□□□□ 0.68
TRUB2O95900 AC010240.3-201ENST00000607688 395 ntBASIC19.29■□□□□ 0.68
TRUB2O95900 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRUB2O95900 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRUB2O95900 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
TRUB2O95900 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRUB2O95900 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRUB2O95900 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TRUB2O95900 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.29■□□□□ 0.68
TRUB2O95900 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRUB2O95900 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.29■□□□□ 0.68
TRUB2O95900 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.29■□□□□ 0.68
TRUB2O95900 AC007613.1-201ENST00000572811 2597 ntBASIC19.29■□□□□ 0.68
TRUB2O95900 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRUB2O95900 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.29■□□□□ 0.68
TRUB2O95900 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
TRUB2O95900 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.28■□□□□ 0.68
TRUB2O95900 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRUB2O95900 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TRUB2O95900 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRUB2O95900 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
TRUB2O95900 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
TRUB2O95900 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TRUB2O95900 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TRUB2O95900 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
TRUB2O95900 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRUB2O95900 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRUB2O95900 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRUB2O95900 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.28■□□□□ 0.68
TRUB2O95900 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.28■□□□□ 0.68
TRUB2O95900 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TRUB2O95900 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TRUB2O95900 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRUB2O95900 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TRUB2O95900 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRUB2O95900 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.28■□□□□ 0.68
TRUB2O95900 HOMER2P1-201ENST00000455653 964 ntBASIC19.28■□□□□ 0.68
TRUB2O95900 AC022616.7-201ENST00000525383 220 ntBASIC19.28■□□□□ 0.68
TRUB2O95900 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.28■□□□□ 0.68
TRUB2O95900 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TRUB2O95900 MIR3917-201ENST00000580971 93 ntBASIC19.28■□□□□ 0.68
TRUB2O95900 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC19.28■□□□□ 0.68
TRUB2O95900 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TRUB2O95900 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC19.28■□□□□ 0.68
TRUB2O95900 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRUB2O95900 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRUB2O95900 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRUB2O95900 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
TRUB2O95900 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRUB2O95900 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.28■□□□□ 0.68
TRUB2O95900 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
TRUB2O95900 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TRUB2O95900 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRUB2O95900 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms