Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 AC012615.1-201ENST00000565797 1299 ntBASIC20.65■□□□□ 0.9
GGPS1O95749 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC20.65■□□□□ 0.9
GGPS1O95749 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC20.65■□□□□ 0.9
GGPS1O95749 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC20.65■□□□□ 0.9
GGPS1O95749 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC20.65■□□□□ 0.9
GGPS1O95749 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC20.65■□□□□ 0.9
GGPS1O95749 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC20.65■□□□□ 0.9
GGPS1O95749 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
GGPS1O95749 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
GGPS1O95749 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
GGPS1O95749 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
GGPS1O95749 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
GGPS1O95749 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
GGPS1O95749 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
GGPS1O95749 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
GGPS1O95749 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
GGPS1O95749 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
GGPS1O95749 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
GGPS1O95749 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC20.64■□□□□ 0.9
GGPS1O95749 AL353692.3-201ENST00000407031 1396 ntBASIC20.64■□□□□ 0.89
GGPS1O95749 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
GGPS1O95749 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
GGPS1O95749 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC20.64■□□□□ 0.89
GGPS1O95749 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
GGPS1O95749 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
GGPS1O95749 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC20.64■□□□□ 0.89
GGPS1O95749 AC111152.3-201ENST00000569699 673 ntBASIC20.64■□□□□ 0.89
GGPS1O95749 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC20.64■□□□□ 0.89
GGPS1O95749 RN7SL510P-201ENST00000581311 263 ntBASIC20.64■□□□□ 0.89
GGPS1O95749 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
GGPS1O95749 AL592071.1-201ENST00000611956 408 ntBASIC20.64■□□□□ 0.89
GGPS1O95749 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
GGPS1O95749 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
GGPS1O95749 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
GGPS1O95749 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
GGPS1O95749 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
GGPS1O95749 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
GGPS1O95749 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC20.63■□□□□ 0.89
GGPS1O95749 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
GGPS1O95749 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
GGPS1O95749 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
GGPS1O95749 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
GGPS1O95749 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
GGPS1O95749 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
GGPS1O95749 MIR149-201ENST00000384879 89 ntBASIC20.63■□□□□ 0.89
GGPS1O95749 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
GGPS1O95749 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC20.63■□□□□ 0.89
GGPS1O95749 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC20.63■□□□□ 0.89
GGPS1O95749 GUSBP12-201ENST00000513727 720 ntBASIC20.63■□□□□ 0.89
GGPS1O95749 AC124864.1-201ENST00000623408 392 ntBASIC20.63■□□□□ 0.89
GGPS1O95749 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
GGPS1O95749 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
GGPS1O95749 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
GGPS1O95749 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
GGPS1O95749 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
GGPS1O95749 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
GGPS1O95749 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
GGPS1O95749 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
GGPS1O95749 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
GGPS1O95749 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
GGPS1O95749 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
GGPS1O95749 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
GGPS1O95749 UROS-202ENST00000368778 1556 ntTSL 2 BASIC20.63■□□□□ 0.89
GGPS1O95749 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.63■□□□□ 0.89
GGPS1O95749 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
GGPS1O95749 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
GGPS1O95749 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
GGPS1O95749 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
GGPS1O95749 AC233702.3-201ENST00000578656 1387 ntBASIC20.62■□□□□ 0.89
GGPS1O95749 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
GGPS1O95749 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
GGPS1O95749 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC20.62■□□□□ 0.89
GGPS1O95749 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
GGPS1O95749 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
GGPS1O95749 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
GGPS1O95749 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
GGPS1O95749 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
GGPS1O95749 RN7SL606P-201ENST00000472779 293 ntBASIC20.62■□□□□ 0.89
GGPS1O95749 AC104819.1-201ENST00000504587 486 ntBASIC20.62■□□□□ 0.89
GGPS1O95749 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC20.62■□□□□ 0.89
GGPS1O95749 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC20.62■□□□□ 0.89
GGPS1O95749 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
GGPS1O95749 TBCB-205ENST00000585746 875 ntTSL 3 BASIC20.62■□□□□ 0.89
GGPS1O95749 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
GGPS1O95749 AL732292.2-201ENST00000609649 430 ntBASIC20.62■□□□□ 0.89
GGPS1O95749 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
GGPS1O95749 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC20.62■□□□□ 0.89
GGPS1O95749 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
GGPS1O95749 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
GGPS1O95749 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
GGPS1O95749 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.62■□□□□ 0.89
GGPS1O95749 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
GGPS1O95749 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.61■□□□□ 0.89
GGPS1O95749 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC20.61■□□□□ 0.89
GGPS1O95749 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
GGPS1O95749 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.61■□□□□ 0.89
GGPS1O95749 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
GGPS1O95749 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
GGPS1O95749 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
GGPS1O95749 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms