Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HOXA2O43364 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HOXA2O43364 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
HOXA2O43364 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.68■□□□□ 0.74
HOXA2O43364 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC19.68■□□□□ 0.74
HOXA2O43364 AC007952.6-201ENST00000573168 2673 ntBASIC19.68■□□□□ 0.74
HOXA2O43364 AC003957.1-201ENST00000625108 2673 ntBASIC19.68■□□□□ 0.74
HOXA2O43364 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HOXA2O43364 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
HOXA2O43364 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HOXA2O43364 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
HOXA2O43364 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.67■□□□□ 0.74
HOXA2O43364 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HOXA2O43364 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HOXA2O43364 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HOXA2O43364 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
HOXA2O43364 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HOXA2O43364 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HOXA2O43364 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
HOXA2O43364 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC19.67■□□□□ 0.74
HOXA2O43364 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC19.67■□□□□ 0.74
HOXA2O43364 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC19.67■□□□□ 0.74
HOXA2O43364 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC19.67■□□□□ 0.74
HOXA2O43364 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC19.67■□□□□ 0.74
HOXA2O43364 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC19.67■□□□□ 0.74
HOXA2O43364 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.67■□□□□ 0.74
HOXA2O43364 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.67■□□□□ 0.74
HOXA2O43364 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.67■□□□□ 0.74
HOXA2O43364 HLA-A-201ENST00000376802 1334 ntBASIC19.67■□□□□ 0.74
HOXA2O43364 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
HOXA2O43364 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
HOXA2O43364 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.67■□□□□ 0.74
HOXA2O43364 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HOXA2O43364 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXA2O43364 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXA2O43364 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXA2O43364 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXA2O43364 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
HOXA2O43364 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXA2O43364 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.66■□□□□ 0.74
HOXA2O43364 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXA2O43364 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXA2O43364 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXA2O43364 THAP5-204ENST00000438865 868 ntTSL 2 BASIC19.66■□□□□ 0.74
HOXA2O43364 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC19.66■□□□□ 0.74
HOXA2O43364 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC19.66■□□□□ 0.74
HOXA2O43364 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC19.66■□□□□ 0.74
HOXA2O43364 COX5A-204ENST00000567270 579 ntTSL 3 BASIC19.66■□□□□ 0.74
HOXA2O43364 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HOXA2O43364 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC19.66■□□□□ 0.74
HOXA2O43364 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
HOXA2O43364 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXA2O43364 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
HOXA2O43364 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXA2O43364 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXA2O43364 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.66■□□□□ 0.74
HOXA2O43364 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXA2O43364 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXA2O43364 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HOXA2O43364 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC19.65■□□□□ 0.74
HOXA2O43364 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HOXA2O43364 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HOXA2O43364 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HOXA2O43364 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HOXA2O43364 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HOXA2O43364 DANCR-204ENST00000444958 709 ntTSL 3 BASIC19.65■□□□□ 0.74
HOXA2O43364 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC19.65■□□□□ 0.74
HOXA2O43364 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC19.65■□□□□ 0.74
HOXA2O43364 BX640515.1-201ENST00000617215 977 ntBASIC19.65■□□□□ 0.74
HOXA2O43364 AC009154.2-201ENST00000621177 724 ntBASIC19.65■□□□□ 0.74
HOXA2O43364 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
HOXA2O43364 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HOXA2O43364 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HOXA2O43364 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
HOXA2O43364 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.65■□□□□ 0.74
HOXA2O43364 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HOXA2O43364 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HOXA2O43364 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HOXA2O43364 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
HOXA2O43364 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
HOXA2O43364 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
HOXA2O43364 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HOXA2O43364 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.65■□□□□ 0.74
HOXA2O43364 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HOXA2O43364 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.64■□□□□ 0.74
HOXA2O43364 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.74
HOXA2O43364 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
HOXA2O43364 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.64■□□□□ 0.74
HOXA2O43364 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HOXA2O43364 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HOXA2O43364 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HOXA2O43364 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HOXA2O43364 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HOXA2O43364 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HOXA2O43364 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC19.64■□□□□ 0.73
HOXA2O43364 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC19.64■□□□□ 0.73
HOXA2O43364 AC068472.1-201ENST00000474589 881 ntBASIC19.64■□□□□ 0.73
HOXA2O43364 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.64■□□□□ 0.73
HOXA2O43364 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC19.64■□□□□ 0.73
HOXA2O43364 CALM1-205ENST00000553542 877 ntTSL 5 BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms