Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
TNFRSF11BO00300 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
TNFRSF11BO00300 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TNFRSF11BO00300 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.06■□□□□ 0.32
TNFRSF11BO00300 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TNFRSF11BO00300 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TNFRSF11BO00300 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
TNFRSF11BO00300 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TNFRSF11BO00300 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TNFRSF11BO00300 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TNFRSF11BO00300 KRT16P5-201ENST00000455284 522 ntBASIC17.06■□□□□ 0.32
TNFRSF11BO00300 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.06■□□□□ 0.32
TNFRSF11BO00300 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TNFRSF11BO00300 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
TNFRSF11BO00300 AL109923.1-201ENST00000618799 583 ntBASIC17.06■□□□□ 0.32
TNFRSF11BO00300 AC139713.2-201ENST00000641328 2723 ntBASIC17.06■□□□□ 0.32
TNFRSF11BO00300 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TNFRSF11BO00300 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.06■□□□□ 0.32
TNFRSF11BO00300 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.06■□□□□ 0.32
TNFRSF11BO00300 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.06■□□□□ 0.32
TNFRSF11BO00300 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.06■□□□□ 0.32
TNFRSF11BO00300 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.06■□□□□ 0.32
TNFRSF11BO00300 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
TNFRSF11BO00300 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TNFRSF11BO00300 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
TNFRSF11BO00300 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TNFRSF11BO00300 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TNFRSF11BO00300 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
TNFRSF11BO00300 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
TNFRSF11BO00300 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TNFRSF11BO00300 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TNFRSF11BO00300 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TNFRSF11BO00300 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TNFRSF11BO00300 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.05■□□□□ 0.32
TNFRSF11BO00300 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TNFRSF11BO00300 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TNFRSF11BO00300 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TNFRSF11BO00300 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TNFRSF11BO00300 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TNFRSF11BO00300 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
TNFRSF11BO00300 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
TNFRSF11BO00300 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TNFRSF11BO00300 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
TNFRSF11BO00300 KRT17P3-201ENST00000420566 1262 ntBASIC17.05■□□□□ 0.32
TNFRSF11BO00300 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17.05■□□□□ 0.32
TNFRSF11BO00300 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TNFRSF11BO00300 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC17.05■□□□□ 0.32
TNFRSF11BO00300 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.05■□□□□ 0.32
TNFRSF11BO00300 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
TNFRSF11BO00300 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
TNFRSF11BO00300 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.05■□□□□ 0.32
TNFRSF11BO00300 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.05■□□□□ 0.32
TNFRSF11BO00300 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
TNFRSF11BO00300 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TNFRSF11BO00300 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.05■□□□□ 0.32
TNFRSF11BO00300 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TNFRSF11BO00300 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
TNFRSF11BO00300 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
TNFRSF11BO00300 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TNFRSF11BO00300 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.04■□□□□ 0.32
TNFRSF11BO00300 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TNFRSF11BO00300 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
TNFRSF11BO00300 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TNFRSF11BO00300 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.04■□□□□ 0.32
TNFRSF11BO00300 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TNFRSF11BO00300 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TNFRSF11BO00300 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TNFRSF11BO00300 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
TNFRSF11BO00300 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TNFRSF11BO00300 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TNFRSF11BO00300 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TNFRSF11BO00300 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TNFRSF11BO00300 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TNFRSF11BO00300 AC004980.1-204ENST00000429707 299 ntBASIC17.04■□□□□ 0.32
TNFRSF11BO00300 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.04■□□□□ 0.32
TNFRSF11BO00300 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.04■□□□□ 0.32
TNFRSF11BO00300 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TNFRSF11BO00300 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.04■□□□□ 0.32
TNFRSF11BO00300 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.04■□□□□ 0.32
TNFRSF11BO00300 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TNFRSF11BO00300 AC069544.1-201ENST00000609399 999 ntBASIC17.04■□□□□ 0.32
TNFRSF11BO00300 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.04■□□□□ 0.32
TNFRSF11BO00300 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TNFRSF11BO00300 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TNFRSF11BO00300 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.04■□□□□ 0.32
TNFRSF11BO00300 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TNFRSF11BO00300 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TNFRSF11BO00300 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
TNFRSF11BO00300 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
TNFRSF11BO00300 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.04■□□□□ 0.32
TNFRSF11BO00300 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
TNFRSF11BO00300 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
TNFRSF11BO00300 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TNFRSF11BO00300 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
TNFRSF11BO00300 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TNFRSF11BO00300 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.04■□□□□ 0.32
TNFRSF11BO00300 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TNFRSF11BO00300 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TNFRSF11BO00300 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TNFRSF11BO00300 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms