Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.23■□□□□ 0.51
TLR4O00206 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TLR4O00206 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TLR4O00206 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.23■□□□□ 0.51
TLR4O00206 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
TLR4O00206 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TLR4O00206 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TLR4O00206 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.23■□□□□ 0.51
TLR4O00206 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TLR4O00206 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC18.23■□□□□ 0.51
TLR4O00206 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TLR4O00206 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.23■□□□□ 0.51
TLR4O00206 AC009065.1-201ENST00000564055 1225 ntBASIC18.23■□□□□ 0.51
TLR4O00206 LINC01711-201ENST00000598340 967 ntBASIC18.23■□□□□ 0.51
TLR4O00206 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC18.23■□□□□ 0.51
TLR4O00206 AC024563.2-201ENST00000603282 481 ntBASIC18.23■□□□□ 0.51
TLR4O00206 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.23■□□□□ 0.51
TLR4O00206 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TLR4O00206 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TLR4O00206 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
TLR4O00206 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TLR4O00206 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TLR4O00206 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
TLR4O00206 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
TLR4O00206 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TLR4O00206 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.23■□□□□ 0.51
TLR4O00206 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC18.23■□□□□ 0.51
TLR4O00206 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TLR4O00206 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.23■□□□□ 0.51
TLR4O00206 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TLR4O00206 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.22■□□□□ 0.51
TLR4O00206 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.22■□□□□ 0.51
TLR4O00206 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TLR4O00206 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TLR4O00206 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TLR4O00206 IGHGP-201ENST00000390555 1178 ntBASIC18.22■□□□□ 0.51
TLR4O00206 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
TLR4O00206 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC18.22■□□□□ 0.51
TLR4O00206 AC104819.1-201ENST00000504587 486 ntBASIC18.22■□□□□ 0.51
TLR4O00206 FOSL1P1-201ENST00000511041 816 ntBASIC18.22■□□□□ 0.51
TLR4O00206 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC18.22■□□□□ 0.51
TLR4O00206 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC18.22■□□□□ 0.51
TLR4O00206 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC18.22■□□□□ 0.51
TLR4O00206 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.22■□□□□ 0.51
TLR4O00206 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TLR4O00206 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
TLR4O00206 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TLR4O00206 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
TLR4O00206 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.22■□□□□ 0.51
TLR4O00206 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TLR4O00206 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TLR4O00206 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.22■□□□□ 0.51
TLR4O00206 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TLR4O00206 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TLR4O00206 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TLR4O00206 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TLR4O00206 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TLR4O00206 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.21■□□□□ 0.51
TLR4O00206 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.21■□□□□ 0.51
TLR4O00206 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TLR4O00206 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
TLR4O00206 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
TLR4O00206 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.21■□□□□ 0.51
TLR4O00206 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TLR4O00206 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TLR4O00206 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TLR4O00206 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.21■□□□□ 0.51
TLR4O00206 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC18.21■□□□□ 0.51
TLR4O00206 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TLR4O00206 EMBP1-201ENST00000458200 901 ntBASIC18.21■□□□□ 0.51
TLR4O00206 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.21■□□□□ 0.51
TLR4O00206 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TLR4O00206 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TLR4O00206 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
TLR4O00206 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TLR4O00206 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TLR4O00206 KRT8P10-201ENST00000450021 1447 ntBASIC18.21■□□□□ 0.51
TLR4O00206 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
TLR4O00206 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TLR4O00206 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
TLR4O00206 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
TLR4O00206 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TLR4O00206 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC18.2■□□□□ 0.5
TLR4O00206 Z98044.1-201ENST00000632503 1764 ntBASIC18.2■□□□□ 0.5
TLR4O00206 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.2■□□□□ 0.5
TLR4O00206 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
TLR4O00206 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TLR4O00206 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TLR4O00206 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TLR4O00206 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TLR4O00206 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TLR4O00206 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TLR4O00206 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
TLR4O00206 KRT18P31-201ENST00000506277 1292 ntBASIC18.2■□□□□ 0.5
TLR4O00206 GUSBP12-201ENST00000513727 720 ntBASIC18.2■□□□□ 0.5
TLR4O00206 TK1-205ENST00000590862 642 ntTSL 3 BASIC18.2■□□□□ 0.5
TLR4O00206 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC18.2■□□□□ 0.5
TLR4O00206 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
TLR4O00206 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TLR4O00206 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms