Protein–RNA interactions for Protein: Q9Y3Q8

TSC22D4, TSC22 domain family protein 4, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D4Q9Y3Q8 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
TSC22D4Q9Y3Q8 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
TSC22D4Q9Y3Q8 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC24.03■■□□□ 1.44
TSC22D4Q9Y3Q8 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
TSC22D4Q9Y3Q8 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
TSC22D4Q9Y3Q8 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
TSC22D4Q9Y3Q8 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC24.03■■□□□ 1.44
TSC22D4Q9Y3Q8 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
TSC22D4Q9Y3Q8 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC24.03■■□□□ 1.44
TSC22D4Q9Y3Q8 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
TSC22D4Q9Y3Q8 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
TSC22D4Q9Y3Q8 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC24.02■■□□□ 1.44
TSC22D4Q9Y3Q8 AGPS-202ENST00000409888 815 ntTSL 4 BASIC24.02■■□□□ 1.44
TSC22D4Q9Y3Q8 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC24.02■■□□□ 1.44
TSC22D4Q9Y3Q8 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC24.02■■□□□ 1.44
TSC22D4Q9Y3Q8 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC24.02■■□□□ 1.44
TSC22D4Q9Y3Q8 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
TSC22D4Q9Y3Q8 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
TSC22D4Q9Y3Q8 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC24.01■■□□□ 1.43
TSC22D4Q9Y3Q8 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
TSC22D4Q9Y3Q8 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC24■■□□□ 1.43
TSC22D4Q9Y3Q8 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC24■■□□□ 1.43
TSC22D4Q9Y3Q8 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
TSC22D4Q9Y3Q8 AC008813.1-201ENST00000536597 885 ntBASIC23.99■■□□□ 1.43
TSC22D4Q9Y3Q8 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC23.99■■□□□ 1.43
TSC22D4Q9Y3Q8 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
TSC22D4Q9Y3Q8 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
TSC22D4Q9Y3Q8 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
TSC22D4Q9Y3Q8 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC23.98■■□□□ 1.43
TSC22D4Q9Y3Q8 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
TSC22D4Q9Y3Q8 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
TSC22D4Q9Y3Q8 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC23.97■■□□□ 1.43
TSC22D4Q9Y3Q8 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC23.97■■□□□ 1.43
TSC22D4Q9Y3Q8 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC23.97■■□□□ 1.43
TSC22D4Q9Y3Q8 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC23.97■■□□□ 1.43
TSC22D4Q9Y3Q8 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC23.97■■□□□ 1.43
TSC22D4Q9Y3Q8 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
TSC22D4Q9Y3Q8 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC23.96■■□□□ 1.43
TSC22D4Q9Y3Q8 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC23.96■■□□□ 1.43
TSC22D4Q9Y3Q8 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC23.96■■□□□ 1.43
TSC22D4Q9Y3Q8 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC23.96■■□□□ 1.43
TSC22D4Q9Y3Q8 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
TSC22D4Q9Y3Q8 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC23.94■■□□□ 1.42
TSC22D4Q9Y3Q8 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
TSC22D4Q9Y3Q8 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC23.94■■□□□ 1.42
TSC22D4Q9Y3Q8 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC23.94■■□□□ 1.42
TSC22D4Q9Y3Q8 RNF166-209ENST00000567844 633 ntTSL 5 BASIC23.94■■□□□ 1.42
TSC22D4Q9Y3Q8 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
TSC22D4Q9Y3Q8 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC23.94■■□□□ 1.42
TSC22D4Q9Y3Q8 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
TSC22D4Q9Y3Q8 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
TSC22D4Q9Y3Q8 HES6-205ENST00000409356 528 ntTSL 2 BASIC23.93■■□□□ 1.42
TSC22D4Q9Y3Q8 MACF1-219ENST00000484793 834 ntTSL 2 BASIC23.93■■□□□ 1.42
TSC22D4Q9Y3Q8 CHST11-202ENST00000546689 756 ntTSL 2 BASIC23.93■■□□□ 1.42
TSC22D4Q9Y3Q8 AC148477.6-201ENST00000623746 465 ntBASIC23.93■■□□□ 1.42
TSC22D4Q9Y3Q8 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC23.93■■□□□ 1.42
TSC22D4Q9Y3Q8 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC23.93■■□□□ 1.42
TSC22D4Q9Y3Q8 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC23.93■■□□□ 1.42
TSC22D4Q9Y3Q8 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
TSC22D4Q9Y3Q8 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
TSC22D4Q9Y3Q8 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
TSC22D4Q9Y3Q8 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
TSC22D4Q9Y3Q8 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
TSC22D4Q9Y3Q8 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC23.91■■□□□ 1.42
TSC22D4Q9Y3Q8 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
TSC22D4Q9Y3Q8 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
TSC22D4Q9Y3Q8 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
TSC22D4Q9Y3Q8 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
TSC22D4Q9Y3Q8 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC23.9■■□□□ 1.42
TSC22D4Q9Y3Q8 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC23.9■■□□□ 1.42
TSC22D4Q9Y3Q8 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
TSC22D4Q9Y3Q8 CR559946.2-201ENST00000623684 991 ntBASIC23.89■■□□□ 1.41
TSC22D4Q9Y3Q8 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC23.89■■□□□ 1.41
TSC22D4Q9Y3Q8 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC23.89■■□□□ 1.41
TSC22D4Q9Y3Q8 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
TSC22D4Q9Y3Q8 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC23.89■■□□□ 1.41
TSC22D4Q9Y3Q8 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
TSC22D4Q9Y3Q8 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
TSC22D4Q9Y3Q8 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
TSC22D4Q9Y3Q8 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
TSC22D4Q9Y3Q8 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC23.88■■□□□ 1.41
TSC22D4Q9Y3Q8 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC23.88■■□□□ 1.41
TSC22D4Q9Y3Q8 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC23.88■■□□□ 1.41
TSC22D4Q9Y3Q8 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC23.88■■□□□ 1.41
TSC22D4Q9Y3Q8 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
TSC22D4Q9Y3Q8 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
TSC22D4Q9Y3Q8 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
TSC22D4Q9Y3Q8 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
TSC22D4Q9Y3Q8 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
TSC22D4Q9Y3Q8 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
TSC22D4Q9Y3Q8 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
TSC22D4Q9Y3Q8 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC23.86■■□□□ 1.41
TSC22D4Q9Y3Q8 MIR3648-2-201ENST00000581792 180 ntBASIC23.86■■□□□ 1.41
TSC22D4Q9Y3Q8 MIR3648-1-201ENST00000615959 180 ntBASIC23.86■■□□□ 1.41
TSC22D4Q9Y3Q8 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
TSC22D4Q9Y3Q8 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
TSC22D4Q9Y3Q8 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
TSC22D4Q9Y3Q8 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
TSC22D4Q9Y3Q8 WHAMMP3-201ENST00000611636 1609 ntBASIC23.85■■□□□ 1.41
TSC22D4Q9Y3Q8 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC23.84■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms