Protein–RNA interactions for Protein: Q9UK58

CCNL1, Cyclin-L1, humanhuman

Predicted RBP Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1Q9UK58 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC32.48■■■□□ 2.79
CCNL1Q9UK58 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC32.48■■■□□ 2.79
CCNL1Q9UK58 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
CCNL1Q9UK58 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC32.47■■■□□ 2.79
CCNL1Q9UK58 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC32.47■■■□□ 2.79
CCNL1Q9UK58 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
CCNL1Q9UK58 AC074183.2-201ENST00000623112 922 ntBASIC32.47■■■□□ 2.79
CCNL1Q9UK58 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
CCNL1Q9UK58 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
CCNL1Q9UK58 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC32.46■■■□□ 2.79
CCNL1Q9UK58 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
CCNL1Q9UK58 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
CCNL1Q9UK58 AC131212.1-201ENST00000613771 668 ntBASIC32.45■■■□□ 2.79
CCNL1Q9UK58 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC32.45■■■□□ 2.78
CCNL1Q9UK58 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
CCNL1Q9UK58 BEX3-202ENST00000372634 753 ntTSL 2 BASIC32.44■■■□□ 2.78
CCNL1Q9UK58 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC32.44■■■□□ 2.78
CCNL1Q9UK58 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC32.44■■■□□ 2.78
CCNL1Q9UK58 AC093536.1-201ENST00000569153 554 ntBASIC32.44■■■□□ 2.78
CCNL1Q9UK58 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC32.44■■■□□ 2.78
CCNL1Q9UK58 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC32.43■■■□□ 2.78
CCNL1Q9UK58 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC32.43■■■□□ 2.78
CCNL1Q9UK58 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC32.43■■■□□ 2.78
CCNL1Q9UK58 RAP2CP1-202ENST00000605179 643 ntBASIC32.43■■■□□ 2.78
CCNL1Q9UK58 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC32.42■■■□□ 2.78
CCNL1Q9UK58 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC32.42■■■□□ 2.78
CCNL1Q9UK58 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC32.42■■■□□ 2.78
CCNL1Q9UK58 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC32.42■■■□□ 2.78
CCNL1Q9UK58 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC32.41■■■□□ 2.78
CCNL1Q9UK58 AC103834.1-201ENST00000520383 144 ntBASIC32.41■■■□□ 2.78
CCNL1Q9UK58 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC32.41■■■□□ 2.78
CCNL1Q9UK58 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
CCNL1Q9UK58 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
CCNL1Q9UK58 AC139795.1-202ENST00000500444 432 ntBASIC32.4■■■□□ 2.78
CCNL1Q9UK58 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
CCNL1Q9UK58 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC32.4■■■□□ 2.78
CCNL1Q9UK58 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC32.4■■■□□ 2.78
CCNL1Q9UK58 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC32.4■■■□□ 2.78
CCNL1Q9UK58 YBX1P4-201ENST00000392794 808 ntBASIC32.39■■■□□ 2.78
CCNL1Q9UK58 HES6-204ENST00000409182 863 ntTSL 2 BASIC32.39■■■□□ 2.78
CCNL1Q9UK58 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC32.39■■■□□ 2.78
CCNL1Q9UK58 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
CCNL1Q9UK58 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC32.39■■■□□ 2.78
CCNL1Q9UK58 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
CCNL1Q9UK58 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC32.38■■■□□ 2.77
CCNL1Q9UK58 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC32.38■■■□□ 2.77
CCNL1Q9UK58 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC32.38■■■□□ 2.77
CCNL1Q9UK58 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
CCNL1Q9UK58 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC32.38■■■□□ 2.77
CCNL1Q9UK58 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC32.37■■■□□ 2.77
CCNL1Q9UK58 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC32.37■■■□□ 2.77
CCNL1Q9UK58 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC32.36■■■□□ 2.77
CCNL1Q9UK58 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC32.36■■■□□ 2.77
CCNL1Q9UK58 THA1P-201ENST00000590384 1145 ntBASIC32.36■■■□□ 2.77
CCNL1Q9UK58 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
CCNL1Q9UK58 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC32.35■■■□□ 2.77
CCNL1Q9UK58 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC32.35■■■□□ 2.77
CCNL1Q9UK58 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC32.35■■■□□ 2.77
CCNL1Q9UK58 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
CCNL1Q9UK58 MIR6765-201ENST00000614092 87 ntBASIC32.35■■■□□ 2.77
CCNL1Q9UK58 PVT1_1.1-201ENST00000615125 194 ntBASIC32.35■■■□□ 2.77
CCNL1Q9UK58 GUSBP5-201ENST00000418136 578 ntBASIC32.34■■■□□ 2.77
CCNL1Q9UK58 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
CCNL1Q9UK58 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
CCNL1Q9UK58 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC32.33■■■□□ 2.77
CCNL1Q9UK58 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC32.32■■■□□ 2.76
CCNL1Q9UK58 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC32.32■■■□□ 2.76
CCNL1Q9UK58 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC32.32■■■□□ 2.76
CCNL1Q9UK58 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
CCNL1Q9UK58 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
CCNL1Q9UK58 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC32.31■■■□□ 2.76
CCNL1Q9UK58 OR2A1-AS1-204ENST00000470435 602 ntBASIC32.31■■■□□ 2.76
CCNL1Q9UK58 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
CCNL1Q9UK58 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC32.3■■■□□ 2.76
CCNL1Q9UK58 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC32.3■■■□□ 2.76
CCNL1Q9UK58 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC32.3■■■□□ 2.76
CCNL1Q9UK58 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
CCNL1Q9UK58 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
CCNL1Q9UK58 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC32.29■■■□□ 2.76
CCNL1Q9UK58 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC32.28■■■□□ 2.76
CCNL1Q9UK58 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
CCNL1Q9UK58 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC32.28■■■□□ 2.76
CCNL1Q9UK58 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
CCNL1Q9UK58 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC32.27■■■□□ 2.76
CCNL1Q9UK58 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
CCNL1Q9UK58 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC32.27■■■□□ 2.76
CCNL1Q9UK58 HYI-210ENST00000486909 905 ntTSL 5 BASIC32.27■■■□□ 2.76
CCNL1Q9UK58 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC32.27■■■□□ 2.76
CCNL1Q9UK58 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.76
CCNL1Q9UK58 AC100797.4-201ENST00000631653 1827 ntBASIC32.26■■■□□ 2.76
CCNL1Q9UK58 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC32.26■■■□□ 2.75
CCNL1Q9UK58 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC32.26■■■□□ 2.75
CCNL1Q9UK58 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
CCNL1Q9UK58 AP004833.2-201ENST00000532228 1454 ntBASIC32.25■■■□□ 2.75
CCNL1Q9UK58 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC32.25■■■□□ 2.75
CCNL1Q9UK58 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC32.25■■■□□ 2.75
CCNL1Q9UK58 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC32.25■■■□□ 2.75
CCNL1Q9UK58 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC32.25■■■□□ 2.75
CCNL1Q9UK58 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC32.25■■■□□ 2.75
CCNL1Q9UK58 PFN2-211ENST00000489155 636 ntTSL 4 BASIC32.24■■■□□ 2.75
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms