Protein–RNA interactions for Protein: Q9NXE8

CWC25, Pre-mRNA-splicing factor CWC25 homolog, humanhuman

Predicted RBP Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CWC25Q9NXE8 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC31.52■■■□□ 2.64
CWC25Q9NXE8 HYI-213ENST00000583037 1322 ntTSL 5 BASIC31.52■■■□□ 2.64
CWC25Q9NXE8 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC31.51■■■□□ 2.64
CWC25Q9NXE8 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
CWC25Q9NXE8 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC31.5■■■□□ 2.63
CWC25Q9NXE8 U85056.1-201ENST00000616429 682 ntBASIC31.5■■■□□ 2.63
CWC25Q9NXE8 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
CWC25Q9NXE8 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC31.49■■■□□ 2.63
CWC25Q9NXE8 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC31.49■■■□□ 2.63
CWC25Q9NXE8 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC31.49■■■□□ 2.63
CWC25Q9NXE8 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
CWC25Q9NXE8 AC018358.1-201ENST00000631079 1402 ntBASIC31.48■■■□□ 2.63
CWC25Q9NXE8 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC31.47■■■□□ 2.63
CWC25Q9NXE8 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC31.47■■■□□ 2.63
CWC25Q9NXE8 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
CWC25Q9NXE8 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC31.47■■■□□ 2.63
CWC25Q9NXE8 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC31.47■■■□□ 2.63
CWC25Q9NXE8 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
CWC25Q9NXE8 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
CWC25Q9NXE8 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
CWC25Q9NXE8 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC31.45■■■□□ 2.63
CWC25Q9NXE8 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
CWC25Q9NXE8 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC31.45■■■□□ 2.62
CWC25Q9NXE8 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC31.44■■■□□ 2.62
CWC25Q9NXE8 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
CWC25Q9NXE8 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC31.43■■■□□ 2.62
CWC25Q9NXE8 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
CWC25Q9NXE8 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC31.43■■■□□ 2.62
CWC25Q9NXE8 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
CWC25Q9NXE8 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
CWC25Q9NXE8 AC139426.1-201ENST00000568218 2529 ntBASIC31.42■■■□□ 2.62
CWC25Q9NXE8 PROC-203ENST00000409048 1586 ntTSL 5 BASIC31.42■■■□□ 2.62
CWC25Q9NXE8 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
CWC25Q9NXE8 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
CWC25Q9NXE8 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC31.41■■■□□ 2.62
CWC25Q9NXE8 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
CWC25Q9NXE8 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
CWC25Q9NXE8 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC31.41■■■□□ 2.62
CWC25Q9NXE8 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC31.4■■■□□ 2.62
CWC25Q9NXE8 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
CWC25Q9NXE8 AC012354.3-201ENST00000623734 483 ntBASIC31.4■■■□□ 2.62
CWC25Q9NXE8 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
CWC25Q9NXE8 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
CWC25Q9NXE8 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC31.39■■■□□ 2.62
CWC25Q9NXE8 AC007029.1-201ENST00000604183 313 ntBASIC31.39■■■□□ 2.62
CWC25Q9NXE8 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
CWC25Q9NXE8 REST-210ENST00000638187 1334 ntTSL 5 BASIC31.39■■■□□ 2.62
CWC25Q9NXE8 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC31.39■■■□□ 2.62
CWC25Q9NXE8 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC31.38■■■□□ 2.61
CWC25Q9NXE8 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
CWC25Q9NXE8 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC31.38■■■□□ 2.61
CWC25Q9NXE8 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
CWC25Q9NXE8 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
CWC25Q9NXE8 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
CWC25Q9NXE8 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC31.37■■■□□ 2.61
CWC25Q9NXE8 SMPD5-203ENST00000639008 1464 ntBASIC31.37■■■□□ 2.61
CWC25Q9NXE8 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
CWC25Q9NXE8 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC31.37■■■□□ 2.61
CWC25Q9NXE8 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
CWC25Q9NXE8 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC31.36■■■□□ 2.61
CWC25Q9NXE8 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC31.36■■■□□ 2.61
CWC25Q9NXE8 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC31.36■■■□□ 2.61
CWC25Q9NXE8 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
CWC25Q9NXE8 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC31.35■■■□□ 2.61
CWC25Q9NXE8 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC31.35■■■□□ 2.61
CWC25Q9NXE8 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC31.35■■■□□ 2.61
CWC25Q9NXE8 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC31.34■■■□□ 2.61
CWC25Q9NXE8 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
CWC25Q9NXE8 KRT18P60-201ENST00000312876 1297 ntBASIC31.33■■■□□ 2.61
CWC25Q9NXE8 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
CWC25Q9NXE8 AC025884.2-201ENST00000553429 711 ntBASIC31.33■■■□□ 2.61
CWC25Q9NXE8 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC31.33■■■□□ 2.61
CWC25Q9NXE8 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC31.32■■■□□ 2.6
CWC25Q9NXE8 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
CWC25Q9NXE8 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
CWC25Q9NXE8 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC31.32■■■□□ 2.6
CWC25Q9NXE8 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC31.32■■■□□ 2.6
CWC25Q9NXE8 DRD5P2-201ENST00000421395 2012 ntBASIC31.31■■■□□ 2.6
CWC25Q9NXE8 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC31.31■■■□□ 2.6
CWC25Q9NXE8 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC31.31■■■□□ 2.6
CWC25Q9NXE8 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC31.31■■■□□ 2.6
CWC25Q9NXE8 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC31.31■■■□□ 2.6
CWC25Q9NXE8 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC31.3■■■□□ 2.6
CWC25Q9NXE8 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC31.3■■■□□ 2.6
CWC25Q9NXE8 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC31.3■■■□□ 2.6
CWC25Q9NXE8 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
CWC25Q9NXE8 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC31.29■■■□□ 2.6
CWC25Q9NXE8 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
CWC25Q9NXE8 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
CWC25Q9NXE8 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
CWC25Q9NXE8 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC31.27■■■□□ 2.6
CWC25Q9NXE8 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
CWC25Q9NXE8 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC31.27■■■□□ 2.6
CWC25Q9NXE8 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
CWC25Q9NXE8 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC31.26■■■□□ 2.59
CWC25Q9NXE8 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC31.26■■■□□ 2.59
CWC25Q9NXE8 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
CWC25Q9NXE8 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC31.25■■■□□ 2.59
CWC25Q9NXE8 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
CWC25Q9NXE8 AC009831.1-201ENST00000580420 1582 ntBASIC31.25■■■□□ 2.59
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms