Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC30.56■■■□□ 2.48
ECHDC1Q9NTX5 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC30.56■■■□□ 2.48
ECHDC1Q9NTX5 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC30.56■■■□□ 2.48
ECHDC1Q9NTX5 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC30.56■■■□□ 2.48
ECHDC1Q9NTX5 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC30.56■■■□□ 2.48
ECHDC1Q9NTX5 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC30.55■■■□□ 2.48
ECHDC1Q9NTX5 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC30.55■■■□□ 2.48
ECHDC1Q9NTX5 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
ECHDC1Q9NTX5 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC30.55■■■□□ 2.48
ECHDC1Q9NTX5 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
ECHDC1Q9NTX5 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC30.55■■■□□ 2.48
ECHDC1Q9NTX5 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
ECHDC1Q9NTX5 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC30.54■■■□□ 2.48
ECHDC1Q9NTX5 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC30.54■■■□□ 2.48
ECHDC1Q9NTX5 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
ECHDC1Q9NTX5 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC30.54■■■□□ 2.48
ECHDC1Q9NTX5 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
ECHDC1Q9NTX5 MIR4449-201ENST00000578365 66 ntBASIC30.53■■■□□ 2.48
ECHDC1Q9NTX5 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
ECHDC1Q9NTX5 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
ECHDC1Q9NTX5 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
ECHDC1Q9NTX5 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
ECHDC1Q9NTX5 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC30.52■■■□□ 2.48
ECHDC1Q9NTX5 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
ECHDC1Q9NTX5 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC30.52■■■□□ 2.48
ECHDC1Q9NTX5 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC30.52■■■□□ 2.48
ECHDC1Q9NTX5 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC30.51■■■□□ 2.48
ECHDC1Q9NTX5 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC30.51■■■□□ 2.48
ECHDC1Q9NTX5 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
ECHDC1Q9NTX5 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
ECHDC1Q9NTX5 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
ECHDC1Q9NTX5 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
ECHDC1Q9NTX5 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
ECHDC1Q9NTX5 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
ECHDC1Q9NTX5 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
ECHDC1Q9NTX5 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC30.48■■■□□ 2.47
ECHDC1Q9NTX5 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
ECHDC1Q9NTX5 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
ECHDC1Q9NTX5 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
ECHDC1Q9NTX5 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
ECHDC1Q9NTX5 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
ECHDC1Q9NTX5 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC30.48■■■□□ 2.47
ECHDC1Q9NTX5 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC30.48■■■□□ 2.47
ECHDC1Q9NTX5 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC30.48■■■□□ 2.47
ECHDC1Q9NTX5 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC30.48■■■□□ 2.47
ECHDC1Q9NTX5 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
ECHDC1Q9NTX5 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC30.46■■■□□ 2.47
ECHDC1Q9NTX5 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC30.46■■■□□ 2.47
ECHDC1Q9NTX5 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC30.45■■■□□ 2.47
ECHDC1Q9NTX5 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC30.45■■■□□ 2.47
ECHDC1Q9NTX5 WHAMMP3-201ENST00000611636 1609 ntBASIC30.45■■■□□ 2.47
ECHDC1Q9NTX5 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
ECHDC1Q9NTX5 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC30.45■■■□□ 2.47
ECHDC1Q9NTX5 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
ECHDC1Q9NTX5 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC30.44■■■□□ 2.46
ECHDC1Q9NTX5 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC30.44■■■□□ 2.46
ECHDC1Q9NTX5 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC30.44■■■□□ 2.46
ECHDC1Q9NTX5 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC30.44■■■□□ 2.46
ECHDC1Q9NTX5 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC30.43■■■□□ 2.46
ECHDC1Q9NTX5 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC30.43■■■□□ 2.46
ECHDC1Q9NTX5 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC30.43■■■□□ 2.46
ECHDC1Q9NTX5 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
ECHDC1Q9NTX5 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC30.43■■■□□ 2.46
ECHDC1Q9NTX5 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC30.43■■■□□ 2.46
ECHDC1Q9NTX5 MED25-210ENST00000612854 801 ntTSL 5 BASIC30.43■■■□□ 2.46
ECHDC1Q9NTX5 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC30.43■■■□□ 2.46
ECHDC1Q9NTX5 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
ECHDC1Q9NTX5 MED25-214ENST00000622402 642 ntTSL 5 BASIC30.43■■■□□ 2.46
ECHDC1Q9NTX5 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
ECHDC1Q9NTX5 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC30.42■■■□□ 2.46
ECHDC1Q9NTX5 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
ECHDC1Q9NTX5 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC30.42■■■□□ 2.46
ECHDC1Q9NTX5 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC30.42■■■□□ 2.46
ECHDC1Q9NTX5 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
ECHDC1Q9NTX5 AL449106.1-201ENST00000608517 1980 ntBASIC30.41■■■□□ 2.46
ECHDC1Q9NTX5 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
ECHDC1Q9NTX5 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
ECHDC1Q9NTX5 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
ECHDC1Q9NTX5 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC30.41■■■□□ 2.46
ECHDC1Q9NTX5 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
ECHDC1Q9NTX5 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC30.4■■■□□ 2.46
ECHDC1Q9NTX5 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
ECHDC1Q9NTX5 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC30.39■■■□□ 2.46
ECHDC1Q9NTX5 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
ECHDC1Q9NTX5 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC30.39■■■□□ 2.46
ECHDC1Q9NTX5 SRP68-213ENST00000629930 165 ntTSL 5 BASIC30.39■■■□□ 2.46
ECHDC1Q9NTX5 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC30.39■■■□□ 2.46
ECHDC1Q9NTX5 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC30.39■■■□□ 2.45
ECHDC1Q9NTX5 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC30.38■■■□□ 2.45
ECHDC1Q9NTX5 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
ECHDC1Q9NTX5 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC30.38■■■□□ 2.45
ECHDC1Q9NTX5 AL121749.1-202ENST00000609313 2153 ntBASIC30.38■■■□□ 2.45
ECHDC1Q9NTX5 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC30.37■■■□□ 2.45
ECHDC1Q9NTX5 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
ECHDC1Q9NTX5 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC30.37■■■□□ 2.45
ECHDC1Q9NTX5 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC30.37■■■□□ 2.45
ECHDC1Q9NTX5 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC30.37■■■□□ 2.45
ECHDC1Q9NTX5 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
ECHDC1Q9NTX5 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
ECHDC1Q9NTX5 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC30.36■■■□□ 2.45
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms