Protein–RNA interactions for Protein: Q9NRA1

PDGFC, Platelet-derived growth factor C, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFCQ9NRA1 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC28.33■■■□□ 2.13
PDGFCQ9NRA1 AC009831.1-201ENST00000580420 1582 ntBASIC28.33■■■□□ 2.12
PDGFCQ9NRA1 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC28.32■■■□□ 2.12
PDGFCQ9NRA1 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
PDGFCQ9NRA1 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
PDGFCQ9NRA1 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
PDGFCQ9NRA1 SMPD5-203ENST00000639008 1464 ntBASIC28.32■■■□□ 2.12
PDGFCQ9NRA1 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC28.32■■■□□ 2.12
PDGFCQ9NRA1 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC28.32■■■□□ 2.12
PDGFCQ9NRA1 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
PDGFCQ9NRA1 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC28.31■■■□□ 2.12
PDGFCQ9NRA1 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
PDGFCQ9NRA1 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
PDGFCQ9NRA1 REST-210ENST00000638187 1334 ntTSL 5 BASIC28.3■■■□□ 2.12
PDGFCQ9NRA1 AL592293.1-201ENST00000502889 1188 ntBASIC28.3■■■□□ 2.12
PDGFCQ9NRA1 AC133552.2-201ENST00000619106 1032 ntBASIC28.3■■■□□ 2.12
PDGFCQ9NRA1 AC129492.7-201ENST00000622992 756 ntBASIC28.3■■■□□ 2.12
PDGFCQ9NRA1 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
PDGFCQ9NRA1 ABCB10P1-201ENST00000614297 2181 ntBASIC28.29■■■□□ 2.12
PDGFCQ9NRA1 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
PDGFCQ9NRA1 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
PDGFCQ9NRA1 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC28.28■■■□□ 2.12
PDGFCQ9NRA1 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC28.28■■■□□ 2.12
PDGFCQ9NRA1 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
PDGFCQ9NRA1 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC28.28■■■□□ 2.12
PDGFCQ9NRA1 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
PDGFCQ9NRA1 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
PDGFCQ9NRA1 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC28.28■■■□□ 2.12
PDGFCQ9NRA1 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
PDGFCQ9NRA1 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC28.27■■■□□ 2.12
PDGFCQ9NRA1 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC28.27■■■□□ 2.12
PDGFCQ9NRA1 DUX4L18-201ENST00000553347 1267 ntBASIC28.26■■■□□ 2.11
PDGFCQ9NRA1 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC28.26■■■□□ 2.11
PDGFCQ9NRA1 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
PDGFCQ9NRA1 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC28.26■■■□□ 2.11
PDGFCQ9NRA1 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
PDGFCQ9NRA1 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC28.25■■■□□ 2.11
PDGFCQ9NRA1 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
PDGFCQ9NRA1 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
PDGFCQ9NRA1 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC28.24■■■□□ 2.11
PDGFCQ9NRA1 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
PDGFCQ9NRA1 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC28.24■■■□□ 2.11
PDGFCQ9NRA1 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC28.24■■■□□ 2.11
PDGFCQ9NRA1 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC28.24■■■□□ 2.11
PDGFCQ9NRA1 AP002414.2-202ENST00000590929 1450 ntBASIC28.23■■■□□ 2.11
PDGFCQ9NRA1 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
PDGFCQ9NRA1 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
PDGFCQ9NRA1 ST7-205ENST00000393446 2114 ntTSL 5 BASIC28.23■■■□□ 2.11
PDGFCQ9NRA1 AC025884.2-201ENST00000553429 711 ntBASIC28.23■■■□□ 2.11
PDGFCQ9NRA1 AC026202.3-201ENST00000600805 1127 ntBASIC28.23■■■□□ 2.11
PDGFCQ9NRA1 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC28.22■■■□□ 2.11
PDGFCQ9NRA1 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC28.22■■■□□ 2.11
PDGFCQ9NRA1 RARRES2P1-201ENST00000474487 481 ntBASIC28.22■■■□□ 2.11
PDGFCQ9NRA1 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC28.22■■■□□ 2.11
PDGFCQ9NRA1 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC28.22■■■□□ 2.11
PDGFCQ9NRA1 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
PDGFCQ9NRA1 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
PDGFCQ9NRA1 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC28.21■■■□□ 2.11
PDGFCQ9NRA1 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC28.21■■■□□ 2.11
PDGFCQ9NRA1 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC28.2■■■□□ 2.11
PDGFCQ9NRA1 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC28.2■■■□□ 2.1
PDGFCQ9NRA1 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC28.2■■■□□ 2.1
PDGFCQ9NRA1 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
PDGFCQ9NRA1 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
PDGFCQ9NRA1 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
PDGFCQ9NRA1 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC28.19■■■□□ 2.1
PDGFCQ9NRA1 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC28.18■■■□□ 2.1
PDGFCQ9NRA1 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC28.18■■■□□ 2.1
PDGFCQ9NRA1 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC28.18■■■□□ 2.1
PDGFCQ9NRA1 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC28.18■■■□□ 2.1
PDGFCQ9NRA1 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
PDGFCQ9NRA1 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
PDGFCQ9NRA1 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC28.16■■■□□ 2.1
PDGFCQ9NRA1 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC28.16■■■□□ 2.1
PDGFCQ9NRA1 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC28.15■■■□□ 2.1
PDGFCQ9NRA1 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
PDGFCQ9NRA1 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
PDGFCQ9NRA1 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
PDGFCQ9NRA1 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
PDGFCQ9NRA1 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
PDGFCQ9NRA1 RP9P-202ENST00000450133 1212 ntBASIC28.14■■■□□ 2.1
PDGFCQ9NRA1 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC28.14■■■□□ 2.1
PDGFCQ9NRA1 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC28.14■■■□□ 2.1
PDGFCQ9NRA1 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
PDGFCQ9NRA1 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC28.13■■■□□ 2.09
PDGFCQ9NRA1 AC093536.1-201ENST00000569153 554 ntBASIC28.13■■■□□ 2.09
PDGFCQ9NRA1 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
PDGFCQ9NRA1 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC28.13■■■□□ 2.09
PDGFCQ9NRA1 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC28.13■■■□□ 2.09
PDGFCQ9NRA1 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC28.12■■■□□ 2.09
PDGFCQ9NRA1 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC28.12■■■□□ 2.09
PDGFCQ9NRA1 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
PDGFCQ9NRA1 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
PDGFCQ9NRA1 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
PDGFCQ9NRA1 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC28.1■■■□□ 2.09
PDGFCQ9NRA1 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
PDGFCQ9NRA1 HES4-204ENST00000484667 667 ntTSL 3 BASIC28.1■■■□□ 2.09
PDGFCQ9NRA1 RAP2CP1-202ENST00000605179 643 ntBASIC28.1■■■□□ 2.09
PDGFCQ9NRA1 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
PDGFCQ9NRA1 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC28.09■■■□□ 2.09
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms