Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
NEUROD4Q9HD90 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
NEUROD4Q9HD90 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC23.49■■□□□ 1.35
NEUROD4Q9HD90 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC23.48■■□□□ 1.35
NEUROD4Q9HD90 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC23.48■■□□□ 1.35
NEUROD4Q9HD90 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC23.48■■□□□ 1.35
NEUROD4Q9HD90 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
NEUROD4Q9HD90 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC23.47■■□□□ 1.35
NEUROD4Q9HD90 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC23.47■■□□□ 1.35
NEUROD4Q9HD90 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC23.47■■□□□ 1.35
NEUROD4Q9HD90 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC23.46■■□□□ 1.35
NEUROD4Q9HD90 RPS2-210ENST00000530225 765 ntTSL 2 BASIC23.46■■□□□ 1.35
NEUROD4Q9HD90 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
NEUROD4Q9HD90 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
NEUROD4Q9HD90 ZNRF2P2-203ENST00000454624 420 ntBASIC23.45■■□□□ 1.34
NEUROD4Q9HD90 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC23.45■■□□□ 1.34
NEUROD4Q9HD90 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
NEUROD4Q9HD90 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC23.44■■□□□ 1.34
NEUROD4Q9HD90 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC23.44■■□□□ 1.34
NEUROD4Q9HD90 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
NEUROD4Q9HD90 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
NEUROD4Q9HD90 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
NEUROD4Q9HD90 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC23.43■■□□□ 1.34
NEUROD4Q9HD90 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
NEUROD4Q9HD90 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC23.42■■□□□ 1.34
NEUROD4Q9HD90 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
NEUROD4Q9HD90 CHML-204ENST00000638121 920 ntTSL 2 BASIC23.42■■□□□ 1.34
NEUROD4Q9HD90 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC23.41■■□□□ 1.34
NEUROD4Q9HD90 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC23.41■■□□□ 1.34
NEUROD4Q9HD90 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
NEUROD4Q9HD90 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC23.41■■□□□ 1.34
NEUROD4Q9HD90 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
NEUROD4Q9HD90 AL449106.1-201ENST00000608517 1980 ntBASIC23.41■■□□□ 1.34
NEUROD4Q9HD90 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
NEUROD4Q9HD90 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC23.4■■□□□ 1.34
NEUROD4Q9HD90 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC23.4■■□□□ 1.34
NEUROD4Q9HD90 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
NEUROD4Q9HD90 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC23.4■■□□□ 1.34
NEUROD4Q9HD90 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC23.39■■□□□ 1.34
NEUROD4Q9HD90 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC23.39■■□□□ 1.34
NEUROD4Q9HD90 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
NEUROD4Q9HD90 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC23.39■■□□□ 1.33
NEUROD4Q9HD90 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
NEUROD4Q9HD90 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
NEUROD4Q9HD90 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
NEUROD4Q9HD90 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
NEUROD4Q9HD90 DUX4L13-201ENST00000554103 1267 ntBASIC23.37■■□□□ 1.33
NEUROD4Q9HD90 DUX4L15-201ENST00000611059 1267 ntBASIC23.37■■□□□ 1.33
NEUROD4Q9HD90 DUX4L23-201ENST00000615195 1269 ntBASIC23.37■■□□□ 1.33
NEUROD4Q9HD90 DUX4L24-201ENST00000617576 1269 ntBASIC23.37■■□□□ 1.33
NEUROD4Q9HD90 DUX4L22-201ENST00000618238 1269 ntBASIC23.37■■□□□ 1.33
NEUROD4Q9HD90 DUX4L20-201ENST00000619712 1269 ntBASIC23.37■■□□□ 1.33
NEUROD4Q9HD90 DUX4L21-201ENST00000622058 1269 ntBASIC23.37■■□□□ 1.33
NEUROD4Q9HD90 DUX4L10-201ENST00000622460 1267 ntBASIC23.37■■□□□ 1.33
NEUROD4Q9HD90 DUX4L25-201ENST00000624915 1269 ntBASIC23.37■■□□□ 1.33
NEUROD4Q9HD90 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
NEUROD4Q9HD90 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
NEUROD4Q9HD90 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC23.36■■□□□ 1.33
NEUROD4Q9HD90 WHAMMP3-201ENST00000611636 1609 ntBASIC23.36■■□□□ 1.33
NEUROD4Q9HD90 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC23.35■■□□□ 1.33
NEUROD4Q9HD90 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC23.35■■□□□ 1.33
NEUROD4Q9HD90 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC23.35■■□□□ 1.33
NEUROD4Q9HD90 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
NEUROD4Q9HD90 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC23.34■■□□□ 1.33
NEUROD4Q9HD90 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
NEUROD4Q9HD90 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC23.33■■□□□ 1.33
NEUROD4Q9HD90 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC23.33■■□□□ 1.33
NEUROD4Q9HD90 AP004609.3-201ENST00000610705 1884 ntBASIC23.33■■□□□ 1.33
NEUROD4Q9HD90 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
NEUROD4Q9HD90 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
NEUROD4Q9HD90 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.32
NEUROD4Q9HD90 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC23.32■■□□□ 1.32
NEUROD4Q9HD90 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
NEUROD4Q9HD90 AC008813.1-201ENST00000536597 885 ntBASIC23.32■■□□□ 1.32
NEUROD4Q9HD90 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
NEUROD4Q9HD90 DUX4L11-201ENST00000611504 1267 ntBASIC23.32■■□□□ 1.32
NEUROD4Q9HD90 DUX4L12-201ENST00000614593 1267 ntBASIC23.32■■□□□ 1.32
NEUROD4Q9HD90 DUX4L14-201ENST00000621227 1267 ntBASIC23.32■■□□□ 1.32
NEUROD4Q9HD90 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
NEUROD4Q9HD90 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
NEUROD4Q9HD90 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC23.32■■□□□ 1.32
NEUROD4Q9HD90 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
NEUROD4Q9HD90 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
NEUROD4Q9HD90 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC23.31■■□□□ 1.32
NEUROD4Q9HD90 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
NEUROD4Q9HD90 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC23.3■■□□□ 1.32
NEUROD4Q9HD90 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
NEUROD4Q9HD90 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
NEUROD4Q9HD90 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
NEUROD4Q9HD90 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC23.3■■□□□ 1.32
NEUROD4Q9HD90 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC23.3■■□□□ 1.32
NEUROD4Q9HD90 SHF-207ENST00000560540 2062 ntTSL 5 BASIC23.29■■□□□ 1.32
NEUROD4Q9HD90 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
NEUROD4Q9HD90 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
NEUROD4Q9HD90 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC23.29■■□□□ 1.32
NEUROD4Q9HD90 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
NEUROD4Q9HD90 CHST11-202ENST00000546689 756 ntTSL 2 BASIC23.29■■□□□ 1.32
NEUROD4Q9HD90 AC142472.1-201ENST00000612013 1741 ntBASIC23.29■■□□□ 1.32
NEUROD4Q9HD90 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
NEUROD4Q9HD90 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms