Protein–RNA interactions for Protein: Q9H8M2

BRD9, Bromodomain-containing protein 9, humanhuman

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9Q9H8M2 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC25.95■■□□□ 1.74
BRD9Q9H8M2 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC25.95■■□□□ 1.74
BRD9Q9H8M2 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC25.95■■□□□ 1.74
BRD9Q9H8M2 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
BRD9Q9H8M2 AC009831.1-201ENST00000580420 1582 ntBASIC25.95■■□□□ 1.74
BRD9Q9H8M2 SMPD5-203ENST00000639008 1464 ntBASIC25.94■■□□□ 1.74
BRD9Q9H8M2 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC25.94■■□□□ 1.74
BRD9Q9H8M2 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
BRD9Q9H8M2 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
BRD9Q9H8M2 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
BRD9Q9H8M2 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC25.93■■□□□ 1.74
BRD9Q9H8M2 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
BRD9Q9H8M2 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC25.93■■□□□ 1.74
BRD9Q9H8M2 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC25.93■■□□□ 1.74
BRD9Q9H8M2 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
BRD9Q9H8M2 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC25.93■■□□□ 1.74
BRD9Q9H8M2 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC25.93■■□□□ 1.74
BRD9Q9H8M2 AL359258.2-201ENST00000564063 1566 ntBASIC25.93■■□□□ 1.74
BRD9Q9H8M2 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
BRD9Q9H8M2 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC25.92■■□□□ 1.74
BRD9Q9H8M2 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC25.92■■□□□ 1.74
BRD9Q9H8M2 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
BRD9Q9H8M2 AC100797.4-201ENST00000631653 1827 ntBASIC25.92■■□□□ 1.74
BRD9Q9H8M2 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
BRD9Q9H8M2 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC25.91■■□□□ 1.74
BRD9Q9H8M2 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC25.91■■□□□ 1.74
BRD9Q9H8M2 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC25.91■■□□□ 1.74
BRD9Q9H8M2 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC25.9■■□□□ 1.74
BRD9Q9H8M2 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
BRD9Q9H8M2 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
BRD9Q9H8M2 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC25.9■■□□□ 1.74
BRD9Q9H8M2 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
BRD9Q9H8M2 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
BRD9Q9H8M2 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
BRD9Q9H8M2 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
BRD9Q9H8M2 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC25.89■■□□□ 1.73
BRD9Q9H8M2 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
BRD9Q9H8M2 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC25.88■■□□□ 1.73
BRD9Q9H8M2 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
BRD9Q9H8M2 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC25.88■■□□□ 1.73
BRD9Q9H8M2 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC25.88■■□□□ 1.73
BRD9Q9H8M2 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
BRD9Q9H8M2 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC25.88■■□□□ 1.73
BRD9Q9H8M2 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
BRD9Q9H8M2 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
BRD9Q9H8M2 HES4-204ENST00000484667 667 ntTSL 3 BASIC25.87■■□□□ 1.73
BRD9Q9H8M2 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
BRD9Q9H8M2 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC25.87■■□□□ 1.73
BRD9Q9H8M2 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
BRD9Q9H8M2 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
BRD9Q9H8M2 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
BRD9Q9H8M2 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC25.85■■□□□ 1.73
BRD9Q9H8M2 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC25.85■■□□□ 1.73
BRD9Q9H8M2 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC25.85■■□□□ 1.73
BRD9Q9H8M2 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
BRD9Q9H8M2 AL139393.2-201ENST00000608721 2025 ntBASIC25.85■■□□□ 1.73
BRD9Q9H8M2 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC25.85■■□□□ 1.73
BRD9Q9H8M2 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC25.84■■□□□ 1.73
BRD9Q9H8M2 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC25.84■■□□□ 1.73
BRD9Q9H8M2 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC25.84■■□□□ 1.73
BRD9Q9H8M2 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC25.84■■□□□ 1.73
BRD9Q9H8M2 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC25.83■■□□□ 1.73
BRD9Q9H8M2 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.73
BRD9Q9H8M2 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.73
BRD9Q9H8M2 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC25.83■■□□□ 1.73
BRD9Q9H8M2 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC25.83■■□□□ 1.73
BRD9Q9H8M2 AC026202.3-201ENST00000600805 1127 ntBASIC25.83■■□□□ 1.73
BRD9Q9H8M2 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC25.83■■□□□ 1.73
BRD9Q9H8M2 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC25.82■■□□□ 1.72
BRD9Q9H8M2 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC25.82■■□□□ 1.72
BRD9Q9H8M2 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC25.82■■□□□ 1.72
BRD9Q9H8M2 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
BRD9Q9H8M2 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
BRD9Q9H8M2 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC25.82■■□□□ 1.72
BRD9Q9H8M2 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC25.81■■□□□ 1.72
BRD9Q9H8M2 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
BRD9Q9H8M2 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC25.81■■□□□ 1.72
BRD9Q9H8M2 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC25.81■■□□□ 1.72
BRD9Q9H8M2 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC25.81■■□□□ 1.72
BRD9Q9H8M2 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
BRD9Q9H8M2 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
BRD9Q9H8M2 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
BRD9Q9H8M2 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
BRD9Q9H8M2 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
BRD9Q9H8M2 RP9P-202ENST00000450133 1212 ntBASIC25.78■■□□□ 1.72
BRD9Q9H8M2 AC025884.2-201ENST00000553429 711 ntBASIC25.78■■□□□ 1.72
BRD9Q9H8M2 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC25.77■■□□□ 1.72
BRD9Q9H8M2 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC25.77■■□□□ 1.72
BRD9Q9H8M2 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC25.77■■□□□ 1.72
BRD9Q9H8M2 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
BRD9Q9H8M2 BHLHE23-202ENST00000612929 1109 ntBASIC25.76■■□□□ 1.71
BRD9Q9H8M2 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
BRD9Q9H8M2 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC25.75■■□□□ 1.71
BRD9Q9H8M2 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
BRD9Q9H8M2 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
BRD9Q9H8M2 DUX4L9-201ENST00000449051 1259 ntBASIC25.75■■□□□ 1.71
BRD9Q9H8M2 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC25.75■■□□□ 1.71
BRD9Q9H8M2 AC093536.1-201ENST00000569153 554 ntBASIC25.75■■□□□ 1.71
BRD9Q9H8M2 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC25.75■■□□□ 1.71
BRD9Q9H8M2 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC25.74■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 125 ms