Protein–RNA interactions for Protein: Q96TA0

PCDHB18P, Putative protocadherin beta-18, humanhuman

Predictions only

Length 734 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18PQ96TA0 DUX4L22-201ENST00000618238 1269 ntBASIC26.57■■□□□ 1.84
PCDHB18PQ96TA0 DUX4L20-201ENST00000619712 1269 ntBASIC26.57■■□□□ 1.84
PCDHB18PQ96TA0 DUX4L21-201ENST00000622058 1269 ntBASIC26.57■■□□□ 1.84
PCDHB18PQ96TA0 DUX4L10-201ENST00000622460 1267 ntBASIC26.57■■□□□ 1.84
PCDHB18PQ96TA0 DUX4L25-201ENST00000624915 1269 ntBASIC26.57■■□□□ 1.84
PCDHB18PQ96TA0 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC26.56■■□□□ 1.84
PCDHB18PQ96TA0 DUX4L11-201ENST00000611504 1267 ntBASIC26.56■■□□□ 1.84
PCDHB18PQ96TA0 DUX4L12-201ENST00000614593 1267 ntBASIC26.56■■□□□ 1.84
PCDHB18PQ96TA0 DUX4L14-201ENST00000621227 1267 ntBASIC26.56■■□□□ 1.84
PCDHB18PQ96TA0 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
PCDHB18PQ96TA0 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
PCDHB18PQ96TA0 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC26.55■■□□□ 1.84
PCDHB18PQ96TA0 AL449106.1-201ENST00000608517 1980 ntBASIC26.55■■□□□ 1.84
PCDHB18PQ96TA0 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
PCDHB18PQ96TA0 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC26.53■■□□□ 1.84
PCDHB18PQ96TA0 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
PCDHB18PQ96TA0 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC26.53■■□□□ 1.84
PCDHB18PQ96TA0 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
PCDHB18PQ96TA0 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
PCDHB18PQ96TA0 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
PCDHB18PQ96TA0 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
PCDHB18PQ96TA0 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
PCDHB18PQ96TA0 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
PCDHB18PQ96TA0 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC26.51■■□□□ 1.83
PCDHB18PQ96TA0 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC26.51■■□□□ 1.83
PCDHB18PQ96TA0 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC26.51■■□□□ 1.83
PCDHB18PQ96TA0 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
PCDHB18PQ96TA0 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
PCDHB18PQ96TA0 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC26.5■■□□□ 1.83
PCDHB18PQ96TA0 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
PCDHB18PQ96TA0 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC26.5■■□□□ 1.83
PCDHB18PQ96TA0 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC26.5■■□□□ 1.83
PCDHB18PQ96TA0 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC26.49■■□□□ 1.83
PCDHB18PQ96TA0 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC26.49■■□□□ 1.83
PCDHB18PQ96TA0 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC26.49■■□□□ 1.83
PCDHB18PQ96TA0 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC26.49■■□□□ 1.83
PCDHB18PQ96TA0 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
PCDHB18PQ96TA0 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
PCDHB18PQ96TA0 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC26.48■■□□□ 1.83
PCDHB18PQ96TA0 ABHD17AP4-201ENST00000411545 909 ntBASIC26.48■■□□□ 1.83
PCDHB18PQ96TA0 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
PCDHB18PQ96TA0 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
PCDHB18PQ96TA0 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
PCDHB18PQ96TA0 CHST11-202ENST00000546689 756 ntTSL 2 BASIC26.47■■□□□ 1.83
PCDHB18PQ96TA0 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC26.47■■□□□ 1.83
PCDHB18PQ96TA0 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
PCDHB18PQ96TA0 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
PCDHB18PQ96TA0 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
PCDHB18PQ96TA0 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
PCDHB18PQ96TA0 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC26.46■■□□□ 1.83
PCDHB18PQ96TA0 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
PCDHB18PQ96TA0 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
PCDHB18PQ96TA0 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
PCDHB18PQ96TA0 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC26.44■■□□□ 1.82
PCDHB18PQ96TA0 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
PCDHB18PQ96TA0 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC26.43■■□□□ 1.82
PCDHB18PQ96TA0 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC26.43■■□□□ 1.82
PCDHB18PQ96TA0 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC26.43■■□□□ 1.82
PCDHB18PQ96TA0 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC26.42■■□□□ 1.82
PCDHB18PQ96TA0 WHAMMP3-201ENST00000611636 1609 ntBASIC26.42■■□□□ 1.82
PCDHB18PQ96TA0 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
PCDHB18PQ96TA0 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
PCDHB18PQ96TA0 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC26.41■■□□□ 1.82
PCDHB18PQ96TA0 AP004609.3-201ENST00000610705 1884 ntBASIC26.41■■□□□ 1.82
PCDHB18PQ96TA0 HES6-205ENST00000409356 528 ntTSL 2 BASIC26.41■■□□□ 1.82
PCDHB18PQ96TA0 CREM-210ENST00000374721 2020 ntTSL 5 BASIC26.41■■□□□ 1.82
PCDHB18PQ96TA0 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC26.4■■□□□ 1.82
PCDHB18PQ96TA0 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC26.4■■□□□ 1.82
PCDHB18PQ96TA0 RNF166-209ENST00000567844 633 ntTSL 5 BASIC26.4■■□□□ 1.82
PCDHB18PQ96TA0 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC26.4■■□□□ 1.82
PCDHB18PQ96TA0 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC26.4■■□□□ 1.82
PCDHB18PQ96TA0 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC26.39■■□□□ 1.82
PCDHB18PQ96TA0 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
PCDHB18PQ96TA0 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC26.39■■□□□ 1.82
PCDHB18PQ96TA0 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC26.38■■□□□ 1.81
PCDHB18PQ96TA0 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
PCDHB18PQ96TA0 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
PCDHB18PQ96TA0 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
PCDHB18PQ96TA0 HLA-V-202ENST00000446817 847 ntBASIC26.37■■□□□ 1.81
PCDHB18PQ96TA0 CR559946.2-201ENST00000623684 991 ntBASIC26.37■■□□□ 1.81
PCDHB18PQ96TA0 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC26.37■■□□□ 1.81
PCDHB18PQ96TA0 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC26.37■■□□□ 1.81
PCDHB18PQ96TA0 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC26.37■■□□□ 1.81
PCDHB18PQ96TA0 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
PCDHB18PQ96TA0 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC26.36■■□□□ 1.81
PCDHB18PQ96TA0 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC26.36■■□□□ 1.81
PCDHB18PQ96TA0 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
PCDHB18PQ96TA0 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
PCDHB18PQ96TA0 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC26.35■■□□□ 1.81
PCDHB18PQ96TA0 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
PCDHB18PQ96TA0 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC26.35■■□□□ 1.81
PCDHB18PQ96TA0 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC26.34■■□□□ 1.81
PCDHB18PQ96TA0 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
PCDHB18PQ96TA0 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC26.34■■□□□ 1.81
PCDHB18PQ96TA0 SHF-207ENST00000560540 2062 ntTSL 5 BASIC26.34■■□□□ 1.81
PCDHB18PQ96TA0 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC26.34■■□□□ 1.81
PCDHB18PQ96TA0 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
PCDHB18PQ96TA0 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
PCDHB18PQ96TA0 AC008813.1-201ENST00000536597 885 ntBASIC26.34■■□□□ 1.81
PCDHB18PQ96TA0 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC26.34■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms