Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
SLC46A1Q96NT5 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
SLC46A1Q96NT5 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC24.03■■□□□ 1.44
SLC46A1Q96NT5 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC24.03■■□□□ 1.44
SLC46A1Q96NT5 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC24.03■■□□□ 1.44
SLC46A1Q96NT5 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.44
SLC46A1Q96NT5 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC24.02■■□□□ 1.44
SLC46A1Q96NT5 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC24.02■■□□□ 1.44
SLC46A1Q96NT5 REST-210ENST00000638187 1334 ntTSL 5 BASIC24.02■■□□□ 1.44
SLC46A1Q96NT5 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
SLC46A1Q96NT5 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
SLC46A1Q96NT5 AL139393.2-201ENST00000608721 2025 ntBASIC24.01■■□□□ 1.43
SLC46A1Q96NT5 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
SLC46A1Q96NT5 HES4-204ENST00000484667 667 ntTSL 3 BASIC24.01■■□□□ 1.43
SLC46A1Q96NT5 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
SLC46A1Q96NT5 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC24.01■■□□□ 1.43
SLC46A1Q96NT5 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC24■■□□□ 1.43
SLC46A1Q96NT5 AP004833.2-201ENST00000532228 1454 ntBASIC24■■□□□ 1.43
SLC46A1Q96NT5 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
SLC46A1Q96NT5 AC133552.2-201ENST00000619106 1032 ntBASIC24■■□□□ 1.43
SLC46A1Q96NT5 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC24■■□□□ 1.43
SLC46A1Q96NT5 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
SLC46A1Q96NT5 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
SLC46A1Q96NT5 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
SLC46A1Q96NT5 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC23.99■■□□□ 1.43
SLC46A1Q96NT5 DUX4L18-201ENST00000553347 1267 ntBASIC23.99■■□□□ 1.43
SLC46A1Q96NT5 ABCB10P3-201ENST00000561950 2166 ntBASIC23.99■■□□□ 1.43
SLC46A1Q96NT5 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC23.98■■□□□ 1.43
SLC46A1Q96NT5 AL592293.1-201ENST00000502889 1188 ntBASIC23.98■■□□□ 1.43
SLC46A1Q96NT5 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
SLC46A1Q96NT5 AC009831.1-201ENST00000580420 1582 ntBASIC23.98■■□□□ 1.43
SLC46A1Q96NT5 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
SLC46A1Q96NT5 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC23.97■■□□□ 1.43
SLC46A1Q96NT5 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC23.97■■□□□ 1.43
SLC46A1Q96NT5 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
SLC46A1Q96NT5 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC23.96■■□□□ 1.43
SLC46A1Q96NT5 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
SLC46A1Q96NT5 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
SLC46A1Q96NT5 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
SLC46A1Q96NT5 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
SLC46A1Q96NT5 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
SLC46A1Q96NT5 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC23.95■■□□□ 1.42
SLC46A1Q96NT5 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC23.95■■□□□ 1.42
SLC46A1Q96NT5 SMPD5-203ENST00000639008 1464 ntBASIC23.94■■□□□ 1.42
SLC46A1Q96NT5 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
SLC46A1Q96NT5 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
SLC46A1Q96NT5 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
SLC46A1Q96NT5 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
SLC46A1Q96NT5 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
SLC46A1Q96NT5 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
SLC46A1Q96NT5 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
SLC46A1Q96NT5 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
SLC46A1Q96NT5 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC23.91■■□□□ 1.42
SLC46A1Q96NT5 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
SLC46A1Q96NT5 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
SLC46A1Q96NT5 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC23.91■■□□□ 1.42
SLC46A1Q96NT5 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC23.91■■□□□ 1.42
SLC46A1Q96NT5 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
SLC46A1Q96NT5 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
SLC46A1Q96NT5 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
SLC46A1Q96NT5 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC23.9■■□□□ 1.42
SLC46A1Q96NT5 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
SLC46A1Q96NT5 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
SLC46A1Q96NT5 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.41
SLC46A1Q96NT5 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC23.89■■□□□ 1.41
SLC46A1Q96NT5 AL035685.1-201ENST00000636663 812 ntBASIC23.89■■□□□ 1.41
SLC46A1Q96NT5 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
SLC46A1Q96NT5 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
SLC46A1Q96NT5 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.41
SLC46A1Q96NT5 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC23.88■■□□□ 1.41
SLC46A1Q96NT5 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.41
SLC46A1Q96NT5 AC026202.3-201ENST00000600805 1127 ntBASIC23.88■■□□□ 1.41
SLC46A1Q96NT5 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC23.88■■□□□ 1.41
SLC46A1Q96NT5 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC23.88■■□□□ 1.41
SLC46A1Q96NT5 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC23.87■■□□□ 1.41
SLC46A1Q96NT5 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC23.87■■□□□ 1.41
SLC46A1Q96NT5 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
SLC46A1Q96NT5 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
SLC46A1Q96NT5 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
SLC46A1Q96NT5 AL359258.2-201ENST00000564063 1566 ntBASIC23.86■■□□□ 1.41
SLC46A1Q96NT5 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
SLC46A1Q96NT5 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
SLC46A1Q96NT5 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
SLC46A1Q96NT5 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC23.85■■□□□ 1.41
SLC46A1Q96NT5 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC23.85■■□□□ 1.41
SLC46A1Q96NT5 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
SLC46A1Q96NT5 AC139426.1-201ENST00000568218 2529 ntBASIC23.85■■□□□ 1.41
SLC46A1Q96NT5 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC23.85■■□□□ 1.41
SLC46A1Q96NT5 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
SLC46A1Q96NT5 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
SLC46A1Q96NT5 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SLC46A1Q96NT5 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
SLC46A1Q96NT5 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
SLC46A1Q96NT5 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
SLC46A1Q96NT5 AL451085.2-201ENST00000605085 799 ntBASIC23.84■■□□□ 1.41
SLC46A1Q96NT5 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC23.84■■□□□ 1.41
SLC46A1Q96NT5 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC23.84■■□□□ 1.41
SLC46A1Q96NT5 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
SLC46A1Q96NT5 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
SLC46A1Q96NT5 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms